RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 OR5W2Q8NH69 310 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 ARL11Q969Q4 196 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 TSACCQ96A04 125 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-216ENST00000523088 GPR146Q96CH1 333 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 CXorf40BQ96DE9 158 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 MMABQ96EY8 250 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-216ENST00000523088 OR10C1Q96KK4 312 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 LYSMD1Q96S90 227 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 COPS8Q99627 209 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 SPRTNQ9H040 489 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-216ENST00000523088 C11orf54Q9H0W9 315 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-216ENST00000523088 SLC25A51Q9H1U9 297 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 CDC42EP4Q9H3Q1 356 aaKnown RBP6.65□□□□□ -1.34
HDAC3-216ENST00000523088 BARX1Q9HBU1 254 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-216ENST00000523088 FGF22Q9HCT0 170 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 DOK5Q9P104 306 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 P2RX2Q9UBL9 471 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 OSGIN2Q9Y236 505 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 PPIAL4AQ9Y536 164 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 RAI2Q9Y5P3 530 aa6.65□□□□□ -1.34
HDAC3-216ENST00000523088 ITPR1Q14643 2758 aa6.65□□□□□ -1.35
HDAC3-216ENST00000523088 FASNP49327 2511 aaKnown RBP6.65□□□□□ -1.35
HDAC3-216ENST00000523088 NBEAQ8NFP9 2946 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 IQCMA0A1B0GVH7 501 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 FEZF1A0PJY2 475 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 TMEM202A6NGA9 273 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 DHRS7CA6NNS2 312 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 HCRTR1O43613 425 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 GNG7O60262 68 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 SLC25A12O75746 678 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 OPN1SWP03999 348 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 ADH4P08319 380 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 HIST1H1EP10412 219 aaKnown RBP6.64□□□□□ -1.35
HDAC3-216ENST00000523088 HSD17B1P14061 328 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 FBLP22087 321 aaKnown RBP6.64□□□□□ -1.35
HDAC3-216ENST00000523088 AZGP1P25311 298 aaKnown RBP6.64□□□□□ -1.35
HDAC3-216ENST00000523088 CHATP28329 748 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 AKR1C2P52895 323 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 TAS2R50P59544 299 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 NKX6-1P78426 367 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-216ENST00000523088 EIF2B1Q14232 305 aaKnown RBP6.64□□□□□ -1.35
HDAC3-216ENST00000523088 CLINT1Q14677 625 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 ASTE1Q2TB18 679 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-216ENST00000523088 TIMM50Q3ZCQ8 353 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 ELFN2Q5R3F8 820 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 C6orf141Q5SZD1 244 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 CBLN3Q6UW01 205 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 IL34Q6ZMJ4 242 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 RNF44Q7L0R7 432 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 FA2HQ7L5A8 372 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 OR4K5Q8NGD3 323 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 RDH11Q8TC12 318 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 PTPMT1Q8WUK0 201 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-216ENST00000523088 ISL2Q96A47 359 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 MOAP1Q96BY2 351 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 ATXN7L3BQ96GX2 97 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 CENPNQ96H22 339 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-216ENST00000523088 GPR82Q96P67 336 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 CDK15Q96Q40 435 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF587Q96SQ5 575 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-216ENST00000523088 SEPHS2Q99611 448 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 MICU1Q9BPX6 476 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 SRSF8Q9BRL6 282 aaKnown RBP6.64□□□□□ -1.35
HDAC3-216ENST00000523088 TCEAL2Q9H3H9 227 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-216ENST00000523088 RBM22Q9NW64 420 aaKnown RBP eCLIP6.64□□□□□ -1.351e-6■■■□□ 15.8
HDAC3-216ENST00000523088 OR5AC2Q9NZP5 309 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 ARMCX1Q9P291 453 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 CDC42EP3Q9UKI2 254 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 TRAPPC2LQ9UL33 140 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 FOXA2Q9Y261 457 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-216ENST00000523088 SIGLEC9Q9Y336 463 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 TPRKBQ9Y3C4 175 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 WDR45Q9Y484 360 aa6.64□□□□□ -1.35
HDAC3-216ENST00000523088 IGSF10Q6WRI0 2623 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF705EA8MWA4 302 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-216ENST00000523088 B4DGG1 531 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF814B7Z6K7 855 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 OR7A17O14581 309 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 P2RX6O15547 441 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 DNPH1O43598 174 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 FAM20BO75063 409 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 CDS2O95674 445 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 AIFM1O95831 613 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 JCHAINP01591 159 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 SULT1A3P0DMM9 295 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 SULT1A4P0DMN0 295 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 AZU1P20160 251 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 HIST1H1TP22492 207 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-216ENST00000523088 IMPA1P29218 277 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 STC1P52823 247 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 UBE2KP61086 200 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 FABP5Q01469 135 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 ZIC1Q15915 447 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 RABL3Q5HYI8 236 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 TPTE2P1Q5T6R2 138 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 HECTD2Q5U5R9 776 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 GGNBP1Q5YKI7 109 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 C22orf42Q6IC83 251 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 RPL22L1Q6P5R6 122 aaKnown RBP6.63□□□□□ -1.35
HDAC3-216ENST00000523088 C17orf82Q86X59 251 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms