RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 KCNG3Q8TAE7 436 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 SLC25A40Q8TBP6 338 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 ENKURQ8TC29 256 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 KLF14Q8TD94 323 aaPredicted RBP7.31□□□□□ -1.24
VAPB-206ENST00000520497 FCAMRQ8WWV6 532 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 PIGTQ969N2 578 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 FAM46BQ96A09 425 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 ZC3HAV1LQ96H79 300 aaKnown RBP7.31□□□□□ -1.24
VAPB-206ENST00000520497 HIST1H2AAQ96QV6 131 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 SOSTQ9BQB4 213 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 C7orf50Q9BRJ6 194 aaKnown RBP7.31□□□□□ -1.24
VAPB-206ENST00000520497 URM1Q9BTM9 101 aaKnown RBP7.31□□□□□ -1.24
VAPB-206ENST00000520497 OR2J1Q9GZK6 312 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 CST11Q9H112 138 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 ATG5Q9H1Y0 275 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 PPP1R3EQ9H7J1 279 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 C14orf119Q9NWQ9 140 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 CRIM1Q9NZV1 1036 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 CGGBP1Q9UFW8 167 aaPredicted RBP7.31□□□□□ -1.24
VAPB-206ENST00000520497 RAB22AQ9UL26 194 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 MRPS28Q9Y2Q9 187 aaKnown RBP7.31□□□□□ -1.24
VAPB-206ENST00000520497 MRPS7Q9Y2R9 242 aaKnown RBP7.31□□□□□ -1.24
VAPB-206ENST00000520497 NOP16Q9Y3C1 178 aaKnown RBP7.31□□□□□ -1.24
VAPB-206ENST00000520497 NBPF19A0A087WUL8 3843 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 DSCAML1Q8TD84 2053 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 AKAP6Q13023 2319 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 A0A0B4J203 849 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 ANKRD30BLA7E2S9 258 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 IQCF6A8MYZ5 107 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 ATP6V1G2-DDX39BF2Z307 99 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 GABARAPH6UMI1 98 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 XRCC3O43542 346 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 GSTZ1O43708 216 aaPredicted RBP7.3□□□□□ -1.24
VAPB-206ENST00000520497 LILRA1O75019 489 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 CYB5AP00167 134 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 CST4P01036 141 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 NRASP01111 189 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 CSF3P09919 207 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 ZNF250P15622 560 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 SELEP16581 610 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 KITLGP21583 273 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 FAUP35544 74 aaKnown RBP7.3□□□□□ -1.24
VAPB-206ENST00000520497 GLRXP35754 106 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 ATP1B3P54709 279 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 BSPH1Q075Z2 132 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 SNTB2Q13425 540 aaKnown RBP7.3□□□□□ -1.24
VAPB-206ENST00000520497 ARL6IP1Q15041 203 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 OXA1LQ15070 435 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 MSMPQ1L6U9 139 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 C2orf76Q3KRA6 126 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 NCMAPQ5T1S8 102 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 ZNF787Q6DD87 383 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 ALKBH2Q6NS38 261 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 Q6ZNX1 250 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 DCDC5Q6ZRR9 648 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 RNF144BQ7Z419 303 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 NUP37Q8NFH4 326 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 OR52N4Q8NGI2 321 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 DEDD2Q8WXF8 326 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 SLC25A28Q96A46 364 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 CMBLQ96DG6 245 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 BORCS8Q96FH0 119 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 THAP7Q9BT49 309 aaPredicted RBP7.3□□□□□ -1.24
VAPB-206ENST00000520497 NGBQ9NPG2 151 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 TAS2R8Q9NYW2 309 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 FBLN5Q9UBX5 448 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 NDRG3Q9UGV2 375 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 DOCK11Q5JSL3 2073 aa7.3□□□□□ -1.24
VAPB-206ENST00000520497 IGLV3-9A0A075B6K5 115 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 TMEM272A0A1B0GTI8 110 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 A0A1B0GWJ7 208 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 SULT1C2O00338 296 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 ABCD4O14678 606 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 SIAH2O43255 324 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 ZNF780AO75290 641 aaPredicted RBP7.29□□□□□ -1.24
VAPB-206ENST00000520497 CTAG2O75638 210 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 KDM4BO94953 1096 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 CLDN1O95832 211 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 CHRM2P08172 466 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 IGFBP2P18065 325 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 CDK2P24941 298 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 RBP2P50120 134 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 FUT6P51993 359 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 TAS2R20P59543 309 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 ACTBP60709 375 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 RPS23P62266 143 aaKnown RBP7.29□□□□□ -1.24
VAPB-206ENST00000520497 ACTG1P63261 375 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 SSBP1Q04837 148 aaKnown RBP7.29□□□□□ -1.24
VAPB-206ENST00000520497 PSG7Q13046 419 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 PRDX4Q13162 271 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 ALKBH6Q3KRA9 238 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 ZNF718Q3SXZ3 478 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 DMRTC1Q5HYR2 192 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 PLCXD3Q63HM9 321 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 OR2T2Q6IF00 324 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 RGS7BPQ6MZT1 257 aaPredicted RBP7.29□□□□□ -1.24
VAPB-206ENST00000520497 ANGPTL5Q86XS5 388 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 SNX29P2Q8IUI4 249 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 TOMM5Q8N4H5 51 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 OR56B1Q8NGI3 324 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms