RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	RCN1	Q15293	331 aa		11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	BTN2A1	Q7KYR7	527 aa		11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	SLC36A1	Q7Z2H8	476 aa		11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	LHFPL3	Q86UP9	236 aa		11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	RDH10	Q8IZV5	341 aa		11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	FGFRL1	Q8N441	504 aa		11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	FAM216B	Q8N7L0	139 aa		11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ZNF671	Q8TAW3	534 aa		11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	C12orf43	Q96C57	262 aa	Known RBP	11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	SUCNR1	Q9BXA5	334 aa		11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	KAAG1	Q9UBP8	84 aa		11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ZNF69	Q9UC07	566 aa		11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	EXOG	Q9Y2C4	368 aa	Known RBP	11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459	PCDHGB1	Q9Y5G3	927 aa		11.74	□□□□□ -0.53
CCHCR1-222	ENST00000507459		A0A0A6YYJ9	748 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	SLC16A6	O15403	523 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	NDUFB3	O43676	98 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	IGHV4-38-2	P0DP08	117 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	AMY2B	P19961	511 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	CCL1	P22362	96 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	KIR3DL2	P43630	455 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	HAAO	P46952	286 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	GABRA2	P47869	451 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ISL1	P61371	349 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	CDON	Q4KMG0	1287 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	TMEM42	Q69YG0	159 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	STUM	Q69YW2	141 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	KCTD20	Q7Z5Y7	419 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	BCL6B	Q8N143	479 aa	Predicted RBP	11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	BATF2	Q8N1L9	274 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	OR2G2	Q8NGZ5	317 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	NPRL2	Q8WTW4	380 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	CYGB	Q8WWM9	190 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	AQP3	Q92482	292 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	TMIGD2	Q96BF3	282 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	C4orf36	Q96KX1	117 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	PCGF1	Q9BSM1	259 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	NLK	Q9UBE8	527 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	MYRF	Q9Y2G1	1151 aa		11.73	□□□□□ -0.53
CCHCR1-222	ENST00000507459	TRAV40	A0A0B4J280	105 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	LOC107986453	A0A1B0GWG9	222 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	FAM230A	A0A1W2PPH8	454 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ANKRD61	A6NGH8	418 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	NKX6-3	A6NJ46	265 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	OR2AT4	A6NND4	320 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	DHRS7C	A6NNS2	312 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	SYNGR1	O43759	233 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	CLIC3	O95833	236 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	HTR1A	P08908	422 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	UBC	P0CG48	685 aa	Known RBP	11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	SELL	P14151	372 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	PEX2	P28328	305 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	HILS1	P60008	231 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	NANOS3	P60323	173 aa	Known RBP	11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459		Q6ZSR3	168 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ZNF573	Q86YE8	665 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	PNLDC1	Q8NA58	520 aa	Known RBP	11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	APH1B	Q8WW43	257 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	RNF166	Q96A37	237 aa	Predicted RBP	11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	UPRT	Q96BW1	309 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	MRPL48	Q96GC5	212 aa	Known RBP	11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ZNF488	Q96MN9	340 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	RDH12	Q96NR8	316 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ALG8	Q9BVK2	526 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	FRRS1L	Q9P0K9	344 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	SLC7A11	Q9UPY5	501 aa		11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	RPL36	Q9Y3U8	105 aa	Known RBP	11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	SOX21	Q9Y651	276 aa	Predicted RBP	11.72	□□□□□ -0.53
CCHCR1-222	ENST00000507459	PQLC2L	A1A4F0	135 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ZNF879	B4DU55	563 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459		J3QT63	122 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	TOX4	O94842	621 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	FADS2	O95864	444 aa	Known RBP	11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ECD	O95905	644 aa	Predicted RBP	11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	LIPF	P07098	398 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	SFTPB	P07988	381 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	PPIAL4G	P0DN37	164 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	TGM4	P49221	684 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ARF6	P62330	175 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ACTA2	P62736	377 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ACTG2	P63267	376 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	GALE	Q14376	348 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	UBE2V2	Q15819	145 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	SMN1	Q16637	294 aa	Known RBP	11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	LRRC10	Q5BKY1	277 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	TMEM244	Q5VVB8	128 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	RBMS3	Q6XE24	437 aa	Known RBP	11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	USP43	Q70EL4	1123 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ANGPTL5	Q86XS5	388 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	SIGLECL1	Q8N7X8	197 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	CCDC54	Q8NEL0	328 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	OR52I1	Q8NGK6	324 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	ANGPTL6	Q8NI99	470 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	H1FX	Q92522	213 aa	Known RBP	11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	PELI1	Q96FA3	418 aa		11.71	□□□□□ -0.53
CCHCR1-222	ENST00000507459	GAFA1	Q96PS6	74 aa		11.71	□□□□□ -0.53

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