RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 BRD7Q9NPI1 651 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 RASL12Q9NYN1 266 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 BAIAP2Q9UQB8 552 aa14.24□□□□□ -0.13
NUP50-218ENST00000493456 A0A1W2PRX2 142 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 E9PQ18 207 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 SLC1A7O00341 560 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 MTRF1O75570 445 aaKnown RBP14.23□□□□□ -0.13
NUP50-218ENST00000493456 FABP3P05413 133 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 MSX2P35548 267 aaPredicted RBP14.23□□□□□ -0.13
NUP50-218ENST00000493456 RAB13P51153 203 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 TMEM200BQ69YZ2 307 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 CALHM1Q8IU99 346 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 DYNAPQ8N1N2 210 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 LINC00471Q8N535 108 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 ZNF561Q8N587 486 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 OR8D4Q8NGM9 314 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 OR6N2Q8NGY6 317 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 B9D2Q9BPU9 175 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 OR51I2Q9H344 312 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 SPAG4Q9NPE6 437 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 TBC1D23Q9NUY8 699 aa14.23□□□□□ -0.13
NUP50-218ENST00000493456 WI2-2373I1.2A0A1W2PRP0 233 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 IFNGP01579 166 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 H2BFMP0C1H6 154 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 CLUP10909 449 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 DYNLT3P51808 116 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 PSME3P61289 254 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 EGFEM1PQ0D2K5 195 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 SMIM21Q3B7S5 101 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 CEACAM21Q3KPI0 293 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 LINC01590Q5TEZ4 76 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 RASSF6Q6ZTQ3 369 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 SHFQ7M4L6 423 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 KRT74Q7RTS7 529 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 ERI1Q8IV48 349 aaKnown RBP14.22□□□□□ -0.13
NUP50-218ENST00000493456 OR5AU1Q8NGC0 362 aa14.22□□□□□ -0.13
NUP50-218ENST00000493456 RFPL4AA6NLU0 287 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 ODF3BA8MYP8 253 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 RFPL4AL1F8VTS6 287 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 F2RL2O00254 374 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 KRT36O76013 467 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 CLIC3O95833 236 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 ARG1P05089 322 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 CCL3L1P16619 93 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 ZNF3P17036 446 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 AZGP1P25311 298 aaKnown RBP14.21□□□□□ -0.13
NUP50-218ENST00000493456 KRTAP10-11P60412 298 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 DCTN2Q13561 401 aaKnown RBP14.21□□□□□ -0.13
NUP50-218ENST00000493456 SAMD4BQ5PRF9 694 aaKnown RBP14.21□□□□□ -0.13
NUP50-218ENST00000493456 ZNF782Q6ZMW2 699 aaPredicted RBP14.21□□□□□ -0.13
NUP50-218ENST00000493456 ACP7Q6ZNF0 438 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.21□□□□□ -0.13
NUP50-218ENST00000493456 OR2T33Q8NG76 320 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 OR13D1Q8NGV5 346 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 FAM81AQ8TBF8 368 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 AQP3Q92482 292 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 ITFG2Q969R8 447 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 LYZL4Q96KX0 146 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 BTBD10Q9BSF8 475 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 TSSK6Q9BXA6 273 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 GPR61Q9BZJ8 451 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 C1orf21Q9H246 121 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 MUC13Q9H3R2 512 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 VIPAS39Q9H9C1 493 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 IL1RAPQ9NPH3 570 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 MAGEL2Q9UJ55 1249 aa14.21□□□□□ -0.13
NUP50-218ENST00000493456 TSSC4Q9Y5U2 329 aaPredicted RBP14.21□□□□□ -0.13
NUP50-218ENST00000493456 OR5B21A6NL26 309 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 RIIAD1A6NNX1 92 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 ZNF732B4DXR9 585 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 H3BUI4 141 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 SYNGR1O43759 233 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 CCDC22O60826 627 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 GSTT1P30711 240 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 BLCAPP62952 87 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 ZNF273Q14593 569 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 SSX2Q16385 188 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 TMEM95Q3KNT9 176 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 ZNF626Q68DY1 528 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 Q6ZS46 218 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 CD177Q8N6Q3 437 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 OR4M1Q8NGD0 313 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 OR9Q2Q8NGE9 314 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 OR2T27Q8NH04 317 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 AMELYQ99218 206 aa14.2□□□□□ -0.14
NUP50-218ENST00000493456 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.2□□□□□ -0.14
NUP50-218ENST00000493456 C17orf98A8MV24 154 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 RBP4P02753 201 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 PRDX2P32119 198 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 MAP2K3P46734 347 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 HMGA2P52926 109 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 PSMA6P60900 246 aaKnown RBP14.19□□□□□ -0.14
NUP50-218ENST00000493456 CEP78Q5JTW2 689 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 HAGHLQ6PII5 290 aaPredicted RBP14.19□□□□□ -0.14
NUP50-218ENST00000493456 HDXQ7Z353 690 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 POC1AQ8NBT0 407 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 OR11H6Q8NGC7 330 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 OR8B12Q8NGG6 310 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 OR5A2Q8NGI9 324 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 OR4Q3Q8NH05 313 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms