RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 GABARAPL1Q9H0R8 117 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 ADGRL4Q9HBW9 690 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 KIF17Q9P2E2 1029 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 NKX1-2Q9UD57 310 aaPredicted RBP8□□□□□ -1.13
TMEM39A-210ENST00000490099 ENOPH1Q9UHY7 261 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 ZNF222Q9UK12 451 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 OAZ3Q9UMX2 235 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 ORC6Q9Y5N6 252 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 POMT1Q9Y6A1 747 aa8□□□□□ -1.13
TMEM39A-210ENST00000490099 WNK1Q9H4A3 2382 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 IGKV1D-17A0A075B6S4 117 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 A0A1B0GTI1 187 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 A0A1B0GUS0 222 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 A0A1B0GVI7 797 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 FAM181BA6NEQ2 426 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 SAC3D1A6NKF1 404 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 OR5B21A6NL26 309 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 SIGLEC5O15389 551 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 NDUFB3O43676 98 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 MITFO75030 526 aaPredicted RBP7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 NOS1APO75052 506 aaPredicted RBP7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 RHBDL1O75783 438 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 TTRP02766 147 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 VHLP40337 213 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 CAV3P56539 151 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 RIPPLY1Q0D2K3 151 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 OCLNQ16625 522 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 DGUOKQ16854 277 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 GFOD2Q3B7J2 385 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 ZNF684Q5T5D7 378 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 OGFRL1Q5TC84 451 aaPredicted RBP7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 NXNL2Q5VZ03 156 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 RUSC1-AS1Q66K80 236 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 ZBTB49Q6ZSB9 765 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 ZDHHC23Q8IYP9 409 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 ELMOD2Q8IZ81 293 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 OR5T2Q8NGG2 359 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 TMEM163Q8TC26 289 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 NPRL2Q8WTW4 380 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 SSMEM1Q8WWF3 244 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 TAF15Q92804 592 aaKnown RBP eCLIP7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 PPP1R14AQ96A00 147 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 TMIGD2Q96BF3 282 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 SDSLQ96GA7 329 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 MED30Q96HR3 178 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 GAFA1Q96PS6 74 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 CNN2Q99439 309 aaKnown RBP7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 CIB1Q99828 191 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 RBM4BQ9BQ04 359 aaKnown RBP7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 CHIAQ9BZP6 476 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 GPR84Q9NQS5 396 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 RASL12Q9NYN1 266 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 MAB21L2Q9Y586 359 aa7.99□□□□□ -1.13
TMEM39A-210ENST00000490099 A0A0U1RQK1 487 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 SLC22A31A6NKX4 558 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 OR2AT4A6NND4 320 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 DHRS7CA6NNS2 312 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 ZNF732B4DXR9 585 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 E9PQ18 207 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 H0YJX3 145 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 PSMD9O00233 223 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 AKR7A2O43488 359 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 MTRF1O75570 445 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 DHRS3O75911 302 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 PSG2P11465 335 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 SELLP14151 372 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 MDKP21741 143 aaPredicted RBP7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 CCL1P22362 96 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 PEX2P28328 305 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 POLR2IP36954 125 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 IER3P46695 156 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 HSPA13P48723 471 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 RIDAP52758 137 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 RPS7P62081 194 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 EGR3Q06889 387 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 MFGE8Q08431 387 aaPredicted RBP7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 LRRC10Q5BKY1 277 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 LCN1P1Q5VSP4 162 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 ZNF322Q6U7Q0 402 aaPredicted RBP7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 BCDIN3DQ7Z5W3 292 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 TCEANCQ8N8B7 351 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 OR14K1Q8NGZ2 314 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 ZNF671Q8TAW3 534 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 OR51E1Q8TCB6 317 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 ST8SIA4Q92187 359 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 AQP3Q92482 292 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 DYRK2Q92630 601 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 LHX4Q969G2 390 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 RDH12Q96NR8 316 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 HIST1H2AAQ96QV6 131 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 APOL4Q9BPW4 351 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 PRRG3Q9BZD7 231 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 KRT84Q9NSB2 600 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 CLN6Q9NWW5 311 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 C1RLQ9NZP8 487 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 NLKQ9UBE8 527 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 MRM2Q9UI43 246 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 V9GYS6 101 aa7.98□□□□□ -1.13
TMEM39A-210ENST00000490099 PQLC2LA1A4F0 135 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 RNASEK-C17orf49H0YIS7 233 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms