RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 Q6ZSR3 168 aa10.67□□□□□ -0.7
HDAC1-209ENST00000484305 DOK3Q7L591 496 aa10.67□□□□□ -0.7
HDAC1-209ENST00000484305 SLC36A1Q7Z2H8 476 aa10.67□□□□□ -0.7
HDAC1-209ENST00000484305 PQLC1Q8N2U9 271 aa10.67□□□□□ -0.7
HDAC1-209ENST00000484305 PNLDC1Q8NA58 520 aaKnown RBP10.67□□□□□ -0.7
HDAC1-209ENST00000484305 AQP3Q92482 292 aa10.67□□□□□ -0.7
HDAC1-209ENST00000484305 RNF166Q96A37 237 aaPredicted RBP10.67□□□□□ -0.7
HDAC1-209ENST00000484305 RNFT2Q96EX2 444 aa10.67□□□□□ -0.7
HDAC1-209ENST00000484305 TBX15Q96SF7 602 aa10.67□□□□□ -0.7
HDAC1-209ENST00000484305 PCGF1Q9BSM1 259 aa10.67□□□□□ -0.7
HDAC1-209ENST00000484305 GPR173Q9NS66 373 aa10.67□□□□□ -0.7
HDAC1-209ENST00000484305 J3QRE1 110 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 DLGAP1O14490 977 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 NDUFB3O43676 98 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 TOX4O94842 621 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 ECDO95905 644 aaPredicted RBP10.66□□□□□ -0.7
HDAC1-209ENST00000484305 GABRB1P18505 474 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 ISL1P61371 349 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 ARF6P62330 175 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 ACTG1P63261 375 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 C11orf91Q3C1V1 193 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 MEDAGQ5VYS4 303 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 HAGHLQ6PII5 290 aaPredicted RBP10.66□□□□□ -0.7
HDAC1-209ENST00000484305 RBMS3Q6XE24 437 aaKnown RBP10.66□□□□□ -0.7
HDAC1-209ENST00000484305 ZNF788Q6ZQV5 615 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 ZBTB49Q6ZSB9 765 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 C9orf139Q6ZV77 190 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 PRSS35Q8N3Z0 413 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 ANGPTL6Q8NI99 470 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 ZNF671Q8TAW3 534 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 C1orf147Q96MC9 270 aaPredicted RBP10.66□□□□□ -0.7
HDAC1-209ENST00000484305 WDFY2Q96P53 400 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 GAFA1Q96PS6 74 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 DUX5Q96PT3 197 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 SIRPDQ9H106 197 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 ACOXLQ9NUZ1 547 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 NLKQ9UBE8 527 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 RPUSD1Q9UJJ7 312 aaKnown RBP10.66□□□□□ -0.7
HDAC1-209ENST00000484305 GNG8Q9UK08 70 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 GMPPBQ9Y5P6 360 aa10.66□□□□□ -0.7
HDAC1-209ENST00000484305 IGKV1D-17A0A075B6S4 117 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 CENPVL3A0A0U1RRI6 287 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 PQLC2LA1A4F0 135 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 DNAJC9-AS1A6NH13 148 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 OR2AT4A6NND4 320 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 DHRS7CA6NNS2 312 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 SYNGR1O43759 233 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 ACAA1P09110 424 aaPredicted RBP10.65□□□□□ -0.7
HDAC1-209ENST00000484305 KIR3DL2P43630 455 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 HAAOP46952 286 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 BAMBIQ13145 260 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 METTL11BQ5VVY1 283 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 ENTHD1Q8IYW4 607 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 LY6G5BQ8NDX9 201 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 TMIGD2Q96BF3 282 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 ZNF488Q96MN9 340 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 DNTTIP1Q9H147 329 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 CNTD2Q9H8S5 307 aa10.65□□□□□ -0.7
HDAC1-209ENST00000484305 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.65□□□□□ -0.7
HDAC1-209ENST00000484305 TENM1Q9UKZ4 2725 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 A0A1B0GVI7 797 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 MDFIC2A0A1B0GVS7 189 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 DAPL1A0PJW8 107 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 TMEM89A2RUT3 159 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 ANKRD61A6NGH8 418 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 NKX6-3A6NJ46 265 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 SYT7O43581 403 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 BAG2O95816 211 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 PSG2P11465 335 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 PRTN3P24158 256 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 GABRA2P47869 451 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 OR12D2P58182 307 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 IL13RA1P78552 427 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 DGUOKQ16854 277 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 CDONQ4KMG0 1287 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 LRRC10Q5BKY1 277 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 GPR157Q5UAW9 335 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 RUSC1-AS1Q66K80 236 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 ACP7Q6ZNF0 438 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 FAM220AQ7Z4H9 259 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 ZNF573Q86YE8 665 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 RDH10Q8IZV5 341 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 RHOXF1Q8NHV9 184 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 TRMT10AQ8TBZ6 339 aaKnown RBP10.64□□□□□ -0.71
HDAC1-209ENST00000484305 GCDHQ92947 438 aaPredicted RBP10.64□□□□□ -0.71
HDAC1-209ENST00000484305 LGALS12Q96DT0 336 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 MED30Q96HR3 178 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 DCTN5Q9BTE1 182 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 PLEKHA1Q9HB21 404 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 FAM118AQ9NWS6 357 aa10.64□□□□□ -0.71
HDAC1-209ENST00000484305 SLC25A10Q9UBX3 287 aaPredicted RBP10.64□□□□□ -0.71
HDAC1-209ENST00000484305 EXOGQ9Y2C4 368 aaKnown RBP10.64□□□□□ -0.71
HDAC1-209ENST00000484305 LOC100130705A0A1B0GUX0 176 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 LOC107986453A0A1B0GWG9 222 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 J3QT63 122 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 GPR37O15354 613 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 SIGLEC5O15389 551 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 SLC16A6O15403 523 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 PGA5P0DJD9 388 aa10.63□□□□□ -0.71
HDAC1-209ENST00000484305 NANOS3P60323 173 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms