RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 SLC37A3Q8NCC5 494 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 OR6K6Q8NGW6 343 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 GNPDA2Q8TDQ7 276 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 MYDGFQ969H8 173 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 HOPXQ9BPY8 73 aaPredicted RBP12.93□□□□□ -0.34
DDX56-210ENST00000479440 YY1AP1Q9H869 796 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 BRD7Q9NPI1 651 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 INPP5EQ9NRR6 644 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 ZMAT5Q9UDW3 170 aaKnown RBP12.93□□□□□ -0.34
DDX56-210ENST00000479440 CDH10Q9Y6N8 788 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 MTRF1O75570 445 aaKnown RBP12.92□□□□□ -0.34
DDX56-210ENST00000479440 ACKR3P25106 362 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 GPM6AP51674 278 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 OR12D2P58182 307 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 SMIM21Q3B7S5 101 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 ZNF626Q68DY1 528 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 Q6ZS46 218 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 RNF144BQ7Z419 303 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 CENPVQ7Z7K6 275 aaPredicted RBP12.92□□□□□ -0.34
DDX56-210ENST00000479440 ZNF511Q8NB15 262 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 OR6N2Q8NGY6 317 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 ZNF671Q8TAW3 534 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 RNF133Q8WVZ7 376 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 PIGCQ92535 297 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 AKR1E2Q96JD6 320 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 MCRIP2Q9BUT9 160 aaKnown RBP12.92□□□□□ -0.34
DDX56-210ENST00000479440 FGF23Q9GZV9 251 aaPredicted RBP12.92□□□□□ -0.34
DDX56-210ENST00000479440 EGLN3Q9H6Z9 239 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 RASL12Q9NYN1 266 aa12.92□□□□□ -0.34
DDX56-210ENST00000479440 SLC22A2O15244 555 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 SPI1P17947 270 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 GNG3P63215 75 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 ZNF273Q14593 569 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 C16orf82Q7Z2V1 217 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 PIGWQ7Z7B1 504 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 LINC00482Q8N8I6 264 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 OR4M1Q8NGD0 313 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 OR51D1Q8NGF3 324 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 OR2T27Q8NH04 317 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 FAM81AQ8TBF8 368 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 CAPSLQ8WWF8 208 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 CHID1Q9BWS9 393 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 ZNF319Q9P2F9 582 aa12.91□□□□□ -0.34
DDX56-210ENST00000479440 RFPL4AA6NLU0 287 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 ZNF732B4DXR9 585 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 RFPL4AL1F8VTS6 287 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 GMNNO75496 209 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 RBP4P02753 201 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 GYPBP06028 91 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 H2BFMP0C1H6 154 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 LMO1P25800 156 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 DYNC1I2Q13409 638 aaKnown RBP12.9□□□□□ -0.34
DDX56-210ENST00000479440 CRMP1Q14194 572 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 TCTEX1D4Q5JR98 221 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 ACP7Q6ZNF0 438 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 RP9Q8TA86 221 aaKnown RBP12.9□□□□□ -0.34
DDX56-210ENST00000479440 INTS14Q96SY0 518 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 ABHD6Q9BV23 337 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 OR51I2Q9H344 312 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 VIPAS39Q9H9C1 493 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 TBC1D23Q9NUY8 699 aa12.9□□□□□ -0.34
DDX56-210ENST00000479440 DCAF13Q9NV06 445 aaKnown RBP12.9□□□□□ -0.34
DDX56-210ENST00000479440 OR5B21A6NL26 309 aa12.89□□□□□ -0.35
DDX56-210ENST00000479440 C17orf98A8MV24 154 aa12.89□□□□□ -0.35
DDX56-210ENST00000479440 HMGB1P1B2RPK0 211 aaPredicted RBP12.89□□□□□ -0.35
DDX56-210ENST00000479440 CHRM2P08172 466 aa12.89□□□□□ -0.35
DDX56-210ENST00000479440 OPRL1P41146 370 aa12.89□□□□□ -0.35
DDX56-210ENST00000479440 NUDT2P50583 147 aa12.89□□□□□ -0.35
DDX56-210ENST00000479440 SLC34A1Q06495 639 aa12.89□□□□□ -0.35
DDX56-210ENST00000479440 MINOS1Q5TGZ0 78 aa12.89□□□□□ -0.35
DDX56-210ENST00000479440 ZNF770Q6IQ21 691 aaPredicted RBP12.89□□□□□ -0.35
DDX56-210ENST00000479440 ERI1Q8IV48 349 aaKnown RBP12.89□□□□□ -0.35
DDX56-210ENST00000479440 POC1AQ8NBT0 407 aa12.89□□□□□ -0.35
DDX56-210ENST00000479440 OR11H6Q8NGC7 330 aa12.89□□□□□ -0.35
DDX56-210ENST00000479440 AQP3Q92482 292 aa12.89□□□□□ -0.35
DDX56-210ENST00000479440 MINOS1-NBL1R4GNA1 71 aa12.89□□□□□ -0.35
DDX56-210ENST00000479440 V9GYQ6 96 aa12.89□□□□□ -0.35
DDX56-210ENST00000479440 PIPP12273 146 aaPredicted RBP12.88□□□□□ -0.35
DDX56-210ENST00000479440 RRM2P31350 389 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 CEACAM21Q3KPI0 293 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 CEP78Q5JTW2 689 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 GLYATQ6IB77 296 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 LCN8Q6JVE9 175 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 C8orf82Q6P1X6 216 aaPredicted RBP12.88□□□□□ -0.35
DDX56-210ENST00000479440 HAGHLQ6PII5 290 aaPredicted RBP12.88□□□□□ -0.35
DDX56-210ENST00000479440 UNQ9370/PRO34162Q6UXP9 181 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 SHFQ7M4L6 423 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.88□□□□□ -0.35
DDX56-210ENST00000479440 CD177Q8N6Q3 437 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 NDNFQ8TB73 568 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 MCUR1Q96AQ8 359 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 NMNAT2Q9BZQ4 307 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 PCDHGB5Q9Y5G0 923 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 HILPDAQ9Y5L2 63 aa12.88□□□□□ -0.35
DDX56-210ENST00000479440 IFNGP01579 166 aa12.87□□□□□ -0.35
DDX56-210ENST00000479440 TK1P04183 234 aa12.87□□□□□ -0.35
DDX56-210ENST00000479440 CLUP10909 449 aa12.87□□□□□ -0.35
DDX56-210ENST00000479440 PRDX2P32119 198 aa12.87□□□□□ -0.35
DDX56-210ENST00000479440 CEBPDP49716 269 aaPredicted RBP12.87□□□□□ -0.35
DDX56-210ENST00000479440 DLX6P56179 175 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms