RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ZNF319Q9P2F9 582 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 NLKQ9UBE8 527 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 DNAH10Q8IVF4 4471 aa4.12□□□□□ -1.75
SNRNP40-204ENST00000474025 DHRS12A0PJE2 317 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 ANXA2P2A6NMY6 339 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 NME4O00746 187 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 RHBDL1O75783 438 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 GLCEO94923 617 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 DIRAS1O95057 198 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 ZFPL1O95159 310 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 BPNT1O95861 308 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 SPARCP09486 303 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 CCL3L1P16619 93 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 GLRA1P23415 457 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 GABRA2P47869 451 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 GSSP48637 474 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 ENTPD1P49961 510 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 DYNLT3P51808 116 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC25A1P53007 311 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF121P58317 390 aaPredicted RBP4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 RPL31P62899 125 aaKnown RBP4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 GRB2P62993 217 aaKnown RBP4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 LIPEQ05469 1076 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.11□□□□□ -1.756e-7■■□□□ 12.5
SNRNP40-204ENST00000474025 PRDX4Q13162 271 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 TAF13Q15543 124 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 MAPRE2Q15555 327 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 GFOD2Q3B7J2 385 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 TM4SF20Q53R12 229 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 TEX30Q5JUR7 227 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 TMEM200BQ69YZ2 307 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF782Q6ZMW2 699 aaPredicted RBP4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 FAM57BQ71RH2 274 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 RNF144BQ7Z419 303 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 THAP5Q7Z6K1 395 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 ARPINQ7Z6K5 226 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 CPLX4Q7Z7G2 160 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 KRTAP19-1Q8IUB9 90 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 FTMTQ8N4E7 242 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 FAM86B1Q8N7N1 296 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 LINC00482Q8N8I6 264 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 CSNK2A3Q8NEV1 391 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 OR52H1Q8NGJ2 320 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 OR2T4Q8NH00 348 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 OR52J3Q8NH60 311 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 OR5P3Q8WZ94 311 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 MYDGFQ969H8 173 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 UTP4Q969X6 686 aaKnown RBP4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 RCN3Q96D15 328 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 SP140LQ9H930 580 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 ABCB9Q9NP78 766 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 SAR1AQ9NR31 198 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 ABCB10Q9NRK6 738 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 MRGBPQ9NV56 204 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 CD300AQ9UGN4 299 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 PITPNC1Q9UKF7 332 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 AP3M1Q9Y2T2 418 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 FAM32AQ9Y421 112 aaKnown RBP4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 TBL2Q9Y4P3 447 aaKnown RBP4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 TSSC4Q9Y5U2 329 aaPredicted RBP4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 MPC1Q9Y5U8 109 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 U3KQK5 164 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 RYR1P21817 5038 aa4.11□□□□□ -1.75
SNRNP40-204ENST00000474025 hCG_1809904A0A1W2PP81 198 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 A0A1W2PPE2 198 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 A0A1W2PPH5 198 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 A0A1W2PR64 198 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 A0A1W2PRV1 198 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 TCRBV4S1A1TA0A5B7 111 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 RFPL4AA6NLU0 287 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF850A8MQ14 1090 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 RFPL4AL1F8VTS6 287 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 F2RL2O00254 374 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF593O00488 134 aaPredicted RBP4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 GSTA4O15217 222 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 PAX4O43316 350 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 MTRF1O75570 445 aaKnown RBP4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 CLIC3O95833 236 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 CST4P01036 141 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 ARG1P05089 322 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 GYPBP06028 91 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 NCK1P16333 377 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 JUNBP17275 347 aaPredicted RBP4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 HSD11B1P28845 292 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 FMO3P31513 532 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 OPRL1P41146 370 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC15A1P46059 708 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 GPM6AP51674 278 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 CAPZA1P52907 286 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 DLX6P56179 175 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 GNG3P63215 75 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 TSPAN31Q12999 210 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 EIF2B1Q14232 305 aaKnown RBP4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF273Q14593 569 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 SNCBQ16143 134 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 SSX2Q16385 188 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF626Q68DY1 528 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 C8orf82Q6P1X6 216 aaPredicted RBP4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 ETV3LQ6ZN32 361 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 KCTD8Q6ZWB6 473 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms