RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ZNF426Q9BUY5 554 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 TMBIM4Q9HC24 238 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 FAM49BQ9NUQ9 324 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 IMP3Q9NV31 184 aaKnown RBP2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 DMAC2Q9NW81 257 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 SDHAF2Q9NX18 166 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 DUX4Q9UBX2 424 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 CLEC2DQ9UHP7 191 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 LGALS13Q9UHV8 139 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 PRSS21Q9Y6M0 314 aa2.84□□□□□ -1.95
HMGB1P25-201ENST00000468402 BRCA2P51587 3418 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 DOCK9Q9BZ29 2069 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 COL4A6Q14031 1691 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 MYO7AQ13402 2215 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 TRAV8-7A0A075B6U6 113 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 PSMB11A5LHX3 300 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNF233A6NK53 670 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 FAM166BA8MTA8 275 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 HIDE1A8MVS5 230 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 HACD1B0YJ81 288 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 TMEM114B3SHH9 223 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 C12orf77C9JDV5 145 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 PGRMC1O00264 195 aaKnown RBP2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 SLC9A3R1O14745 358 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 PI15O43692 258 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 TRAPPC6AO75865 159 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 ATP6V1G2O95670 118 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 CD160O95971 181 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 GCGP01275 180 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 TNNC2P02585 160 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 SEMG1P04279 462 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 GFAPP14136 432 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNF7P17097 686 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 HSD11B1P28845 292 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 GTF2H1P32780 548 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 CEACAM3P40198 252 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 RAB7AP51149 207 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 DIO3P55073 304 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 TAS2R19P59542 299 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 ARF6P62330 175 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNF92Q03936 586 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 NAB1Q13506 487 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNHIT3Q15649 155 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 TAL2Q16559 108 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 DEFB115Q30KQ5 88 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 BSXQ3C1V8 233 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 SLC36A2Q495M3 483 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 PIGGQ5H8A4 983 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 ATAD3CQ5T2N8 411 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 CCNJQ5T5M9 372 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 UBE2UQ5VVX9 321 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 FAM45BPQ6NSW5 357 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 RWDD4Q6NW29 188 aaKnown RBP2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 CD300LGQ6UXG3 332 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 C12orf54Q6X4T0 127 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 CCDC121Q6ZUS5 278 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 NT5DC3Q86UY8 548 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZBTB8OSQ8IWT0 167 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 VKORC1L1Q8N0U8 176 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 Q8N402 240 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 CDRT4Q8N9R6 151 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 DUSP18Q8NEJ0 188 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 CCDC54Q8NEL0 328 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR51S1Q8NGJ8 323 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR5D18Q8NGL1 313 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR2L8Q8NGY9 312 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 ITFG1Q8TB96 612 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 FAM45AQ8TCE6 357 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 BAALCQ8WXS3 180 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 ARPC1AQ92747 370 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 CEP19Q96LK0 163 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 SERPINB12Q96P63 405 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 SMIM14Q96QK8 99 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 NICN1Q9BSH3 213 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 NAA50Q9GZZ1 169 aaKnown RBP2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 C20orf85Q9H1P6 137 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 DSN1Q9H410 356 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 PLEKHA1Q9HB21 404 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 BATF3Q9NR55 127 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 SLC2A9Q9NRM0 540 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 RHBDL2Q9NX52 303 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 BABAM2Q9NXR7 383 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 UVRAGQ9P2Y5 699 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 KLK13Q9UKR3 277 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 SLC25A15Q9Y619 301 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 TANC1Q9C0D5 1861 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 DOCK4Q8N1I0 1966 aa2.83□□□□□ -1.96
HMGB1P25-201ENST00000468402 HTTP42858 3142 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 IGKV6D-21A0A0A0MT36 114 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 A0A1W2PRG6 482 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 TVP23AA6NH52 213 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 CLDN34H7C241 214 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 M0QYV0 167 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 PLPP3O14495 311 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNF354AO60765 605 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 ALOX12BO75342 701 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 FKBP6O75344 327 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 CLDN11O75508 207 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 BANF1O75531 89 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 LYPLA2O95372 231 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms