RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 GPM6AP51674 278 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 BMXP51813 675 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 ATP1B3P54709 279 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 MTCP1P56278 107 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 ZP1P60852 638 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 RPS23P62266 143 aaKnown RBP5.04□□□□□ -1.6
USP39-213ENST00000467885 TLE4Q04727 773 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 PDZK1IP1Q13113 114 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 RIN1Q13671 783 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 MPPED2Q15777 294 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 NKAPLQ5M9Q1 402 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 DTX2Q86UW9 622 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 TMEM200AQ86VY9 491 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 CALHM1Q8IU99 346 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 ZDHHC23Q8IYP9 409 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 FBXL14Q8N1E6 418 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 MUC15Q8N387 334 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 SCCPDHQ8NBX0 429 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 OR4D6Q8NGJ1 314 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 SPSB1Q96BD6 273 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 C14orf79Q96F83 325 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 TECTBQ96PL2 329 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 TRAF4Q9BUZ4 470 aaPredicted RBP5.04□□□□□ -1.6
USP39-213ENST00000467885 PAPOLGQ9BWT3 736 aaKnown RBP5.04□□□□□ -1.6
USP39-213ENST00000467885 SLITRK2Q9H156 845 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 TLNRD1Q9H1K6 362 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 CXXC4Q9H2H0 198 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 LIME1Q9H400 295 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 CYSLTR2Q9NS75 346 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 CBLN4Q9NTU7 201 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 NKIRAS2Q9NYR9 191 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 MTCH1Q9NZJ7 389 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 CGGBP1Q9UFW8 167 aaPredicted RBP5.04□□□□□ -1.6
USP39-213ENST00000467885 POU2F3Q9UKI9 436 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 SLC7A11Q9UPY5 501 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 A0A075B6Q4 140 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 A0A0B4J203 849 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 OR5B21A6NL26 309 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 AIPO00170 330 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 SLC17A2O00624 439 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 CDIPTO14735 213 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 TNFRSF13BO14836 293 aaPredicted RBP5.03□□□□□ -1.6
USP39-213ENST00000467885 SYNGR1O43759 233 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 TMEM127O75204 238 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 RHBDL1O75783 438 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 PAHP00439 452 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 GRPP07492 148 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 CD55P08174 381 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 TMEM225BP0DP42 221 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 COX6B1P14854 86 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 MYL9P24844 172 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 COL8A2P25067 703 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 MPZP25189 248 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 ZNF93P35789 620 aaPredicted RBP5.03□□□□□ -1.6
USP39-213ENST00000467885 CD200P41217 278 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 NPBWR2P48146 333 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 CLDN12P56749 244 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 KRTAP10-9P60411 292 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 ERVK11-1P61568 191 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 PPP3R1P63098 170 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 GNG3P63215 75 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 PLA2G7Q13093 441 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 ZNF154Q13106 437 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 HNRNPA0Q13151 305 aaKnown RBP5.03□□□□□ -1.6
USP39-213ENST00000467885 OR8G1Q15617 311 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 IDNKQ5T6J7 187 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 AGAP6Q5VW22 663 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 PLCXD3Q63HM9 321 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 GLT8D1Q68CQ7 371 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 HIST2H2BCQ6DN03 193 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 SFXN4Q6P4A7 337 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 ZNF826PQ6ZT77 177 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 LHFPL2Q6ZUX7 228 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 BIVMQ86UB2 503 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 ZNF573Q86YE8 665 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 TGIF2LYQ8IUE0 185 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 CROCCP3Q8IVE0 287 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 SAXO1Q8IYX7 474 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 FTMTQ8N4E7 242 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 CELF2-AS1Q8N7Q2 184 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 ZSCAN4Q8NAM6 433 aaPredicted RBP5.03□□□□□ -1.6
USP39-213ENST00000467885 PXT1Q8NFP0 134 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 OR2Z1Q8NG97 314 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 OR51D1Q8NGF3 324 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 OR5H6Q8NGV6 325 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 OR51F2Q8NH61 342 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 TRMT10AQ8TBZ6 339 aaKnown RBP5.03□□□□□ -1.6
USP39-213ENST00000467885 NPRL2Q8WTW4 380 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 AQP3Q92482 292 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 DVL3Q92997 716 aaPredicted RBP5.03□□□□□ -1.6
USP39-213ENST00000467885 FBXW5Q969U6 566 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 FAM3DQ96BQ1 224 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 MEGF10Q96KG7 1140 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 DIRC2Q96SL1 478 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 MICU1Q9BPX6 476 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 SOSTQ9BQB4 213 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 UQCC2Q9BRT2 126 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 MIXL1Q9H2W2 232 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 METTL17Q9H7H0 456 aaPredicted RBP5.03□□□□□ -1.6
USP39-213ENST00000467885 CKLFQ9UBR5 152 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms