RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 MRPS11P82912 194 aaKnown RBP3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 PPP2R2BQ00005 443 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 IL24Q13007 206 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 GINS1Q14691 196 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 KPNB1Q14974 876 aaKnown RBP3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 CLEC12BQ2HXU8 276 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ZNF718Q3SXZ3 478 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 SLC35D3Q5M8T2 416 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ELFN2Q5R3F8 820 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 LINC01590Q5TEZ4 76 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 SLX4IPQ5VYV7 408 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ACSM5Q6NUN0 579 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ZNF774Q6NX45 483 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 FIP1L1Q6UN15 594 aaKnown RBP3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 CLEC2AQ6UVW9 174 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 COLCA1Q6ZS62 124 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 RFPL4BQ6ZWI9 263 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 BIVMQ86UB2 503 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 CCDC190Q86UF4 302 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ZNF679Q8IYX0 411 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ZNF101Q8IZC7 436 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 BOLLQ8N9W6 283 aaKnown RBP3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 CYB561A3Q8NBI2 242 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 PROKR2Q8NFJ6 384 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 SYNPRQ8TBG9 265 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 C10orf105Q8TEF2 133 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 C18orf12Q96KH6 178 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 C4orf45Q96LM5 186 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 SORCS2Q96PQ0 1159 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 GFI1Q99684 422 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 GABARAPL3Q9BY60 117 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 PRRG3Q9BZD7 231 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 RAB1BQ9H0U4 201 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 RERGLQ9H628 205 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 DYNLRB1Q9NP97 96 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 PNRC2Q9NPJ4 139 aaKnown RBP3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 USE1Q9NZ43 259 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 POLR1DQ9Y2S0 133 aa3.94□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 A0A1W2PPW3 197 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 LOC390937A0A1W2PQ73 354 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 PRR23D1E9PI22 279 aaPredicted RBP3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 E9PQ18 207 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 H7C1Q1 480 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 RRHO14718 337 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 RER1O15258 196 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 SCGB2A1O75556 95 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 SPDEFO95238 335 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ALPLP05186 524 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ADRA2AP08913 450 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ACSM4P0C7M7 580 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 PRR23D2P0DMB1 279 aaPredicted RBP3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 EGR2P11161 476 aaPredicted RBP3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ZNF23P17027 643 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 PI3P19957 117 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 KITLGP21583 273 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 SLC2A5P22732 501 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 IGFBP5P24593 272 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 GABRA5P31644 462 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 PYCR1P32322 319 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ENTPD1P49961 510 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 PDLIM4P50479 330 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ERFP50548 548 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 SLURP1P55000 103 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ERVS71-1P61550 626 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 GABPB1Q06547 395 aaPredicted RBP3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 LOXL1Q08397 574 aaPredicted RBP3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 RSPO1Q2MKA7 263 aaPredicted RBP3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 C12orf73Q69YU5 71 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 DRAM2Q6UX65 266 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 FBXW12Q6X9E4 464 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 SHFQ7M4L6 423 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 AMIGO2Q86SJ2 522 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 LRP11Q86VZ4 500 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 CDH26Q8IXH8 852 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ZNF786Q8N393 782 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 GCSAMQ8N6F7 178 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 IQCF1Q8N6M8 205 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 OR56B1Q8NGI3 324 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 OR5L1Q8NGL2 311 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 OR9Q1Q8NGQ5 310 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 OR1J1Q8NGS3 322 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 OR2AJ1Q8NGZ0 328 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 SLC25A40Q8TBP6 338 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 KLF14Q8TD94 323 aaPredicted RBP3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ZNRF4Q8WWF5 429 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 FAM168AQ92567 244 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ITFG2Q969R8 447 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 APOBEC3DQ96AK3 386 aaPredicted RBP3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 HAVCR1Q96D42 359 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 PLEKHA8Q96JA3 519 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 FOXN4Q96NZ1 517 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 PITX2Q99697 317 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 CIB1Q99828 191 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 ATF6BQ99941 703 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 RBM4BQ9BQ04 359 aaKnown RBP3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 RHNO1Q9BSD3 238 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 OR2J1Q9GZK6 312 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 TOR3AQ9H497 397 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 CYSLTR2Q9NS75 346 aa3.93□□□□□ -1.78
RNU6ATAC28P-201ENST00000459249 CNOT2Q9NZN8 540 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms