RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 DCUN1D4Q92564 292 aa10.93□□□□□ -0.66
ECHDC1-209ENST00000454591 RRNAD1Q96FB5 475 aaKnown RBP10.93□□□□□ -0.66
ECHDC1-209ENST00000454591 S100A13Q99584 98 aa10.93□□□□□ -0.66
ECHDC1-209ENST00000454591 METTL9Q9H1A3 318 aa10.93□□□□□ -0.66
ECHDC1-209ENST00000454591 TMEM38BQ9NVV0 291 aa10.93□□□□□ -0.66
ECHDC1-209ENST00000454591 PLEK2Q9NYT0 353 aa10.93□□□□□ -0.66
ECHDC1-209ENST00000454591 TAS2R3Q9NYW6 316 aa10.93□□□□□ -0.66
ECHDC1-209ENST00000454591 EHFQ9NZC4 300 aa10.93□□□□□ -0.66
ECHDC1-209ENST00000454591 MEMO1Q9Y316 297 aa10.93□□□□□ -0.66
ECHDC1-209ENST00000454591 GALR2O43603 387 aaPredicted RBP10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 CSTBP04080 98 aaKnown RBP10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 BTN1A1Q13410 526 aa10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 CHRFAM7AQ494W8 412 aa10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 PXDC1Q5TGL8 231 aa10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 DHRS11Q6UWP2 260 aa10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 OR1F12Q8NHA8 337 aa10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 RNF141Q8WVD5 230 aa10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 TMEM45BQ96B21 275 aa10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 SAT2Q96F10 170 aaPredicted RBP10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 TECTBQ96PL2 329 aa10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 RBM24Q9BX46 236 aaKnown RBP10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 SLC6A15Q9H2J7 730 aa10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 C1orf123Q9NWV4 160 aa10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 TUBD1Q9UJT1 453 aa10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 C14orf166Q9Y224 244 aaKnown RBP10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 SPTBN5Q9NRC6 3674 aaKnown RBP10.92□□□□□ -0.66
ECHDC1-209ENST00000454591 C13orf42A0A1B0GVH6 325 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 CRYM-AS1A6NIL9 109 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 LINC01387J3KSC0 135 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 DNASE2O00115 360 aaPredicted RBP10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 TNFSF11O14788 317 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 IFNA2P01563 188 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 FAM157CP0CG43 387 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 CCL4P13236 92 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 SERPINA2P20848 420 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 ACKR3P25106 362 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 PCBD1P61457 104 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 ATXN7L3Q14CW9 347 aaPredicted RBP10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 SNAI3Q3KNW1 292 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 RPUSD3Q6P087 351 aaKnown RBP10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 IL34Q6ZMJ4 242 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 BPIFCQ8NFQ6 507 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 OR5T2Q8NGG2 359 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 SPSB4Q96A44 273 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 ST6GALNAC5Q9BVH7 336 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 SLC5A7Q9GZV3 580 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 MCTS1Q9ULC4 181 aaKnown RBP10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 PCDHB10Q9UN67 800 aa10.91□□□□□ -0.66
ECHDC1-209ENST00000454591 IGHV3-15A0A0B4J1V0 119 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 PMS2P1A4D2B8 440 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 LRRC3CA6NJW4 275 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 ABCD4O14678 606 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 GAPDHP04406 335 aaKnown RBP10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 P04436 131 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 SERPINA5P05154 406 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 DBHP09172 617 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 GLRA1P23415 457 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 CHATP28329 748 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 PTGER4P35408 488 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 UCP3P55916 312 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 SLC9A3R2Q15599 337 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 OR8B8Q15620 311 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 CCDC157Q569K6 752 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 BEX5Q5H9J7 111 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 GALNTL5Q7Z4T8 443 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 PPP1R32Q7Z5V6 425 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 LRRC18Q8N456 261 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 LRTM2Q8N967 370 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 Q8NFD4 153 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 OR1S2Q8NGQ3 325 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 ADAMTS17Q8TE56 1095 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 GALNT14Q96FL9 552 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 REEP6Q96HR9 211 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 OR10C1Q96KK4 312 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 FSCN3Q9NQT6 498 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 MMP26Q9NRE1 261 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 ANXA10Q9UJ72 324 aa10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 CARHSP1Q9Y2V2 147 aaKnown RBP10.9□□□□□ -0.66
ECHDC1-209ENST00000454591 hCG_38984A0A1B0GV85 526 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 TMEM218A2RU14 115 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 MSTNO14793 375 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 GDF9O60383 454 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 CYTIPO60759 359 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 ADAP1O75689 374 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 H2AFB1P0C5Y9 115 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 CTRB1P17538 263 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 ACP1P24666 158 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 RBP2P50120 134 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 CARD18P57730 90 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 HGFACQ04756 655 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 RBM39Q14498 530 aaKnown RBP10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 TRIM61Q5EBN2 209 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 ZNF468Q5VIY5 522 aaPredicted RBP10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 CTRB2Q6GPI1 263 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM122CQ6P4D5 195 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 SLC23A3Q6PIS1 610 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 OR5D18Q8NGL1 313 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 OR2V1Q8NHB1 315 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 PIGTQ969N2 578 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 ARL11Q969Q4 196 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms