RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 JMJD1CQ15652 2540 aa13.1□□□□□ -0.31
ACTB-206ENST00000443528 IRGMA1A4Y4 181 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 ANKRD61A6NGH8 418 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 H0YHG0 523 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 AKR7A2O43488 359 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 NDUFA2O43678 99 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 XPNPEP2O43895 674 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 FCN3O75636 299 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 MUC1P15941 1255 aaPredicted RBP13.09□□□□□ -0.31
ACTB-206ENST00000443528 GATA3P23771 443 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 GNB2P62879 340 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 OR2G6Q5TZ20 316 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 WDR25Q64LD2 544 aaPredicted RBP13.09□□□□□ -0.31
ACTB-206ENST00000443528 HAGHLQ6PII5 290 aaPredicted RBP13.09□□□□□ -0.31
ACTB-206ENST00000443528 NLRC3Q7RTR2 1065 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 OR51A4Q8NGJ6 313 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 DACT3Q96B18 629 aaPredicted RBP13.09□□□□□ -0.31
ACTB-206ENST00000443528 C10orf35Q96D05 121 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 ADAT3Q96EY9 351 aaPredicted RBP13.09□□□□□ -0.31
ACTB-206ENST00000443528 PLEKHA1Q9HB21 404 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 PLCXD1Q9NUJ7 323 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 OPN4Q9UHM6 478 aa13.09□□□□□ -0.31
ACTB-206ENST00000443528 CAB39Q9Y376 341 aaPredicted RBP13.09□□□□□ -0.31
ACTB-206ENST00000443528 ARHGAP32A7KAX9 2087 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 J3QLI3 93 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 ADAM20O43506 726 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 ZNF12P17014 697 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 AMY2BP19961 511 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 TGM4P49221 684 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 GTF2A1P52655 376 aaPredicted RBP13.08□□□□□ -0.32
ACTB-206ENST00000443528 GBX2P52951 348 aaPredicted RBP13.08□□□□□ -0.32
ACTB-206ENST00000443528 GMFBP60983 142 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 MRPL28Q13084 256 aaKnown RBP13.08□□□□□ -0.32
ACTB-206ENST00000443528 MICBQ29980 383 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 XAF1Q6GPH4 301 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 FGGYQ96C11 551 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 TMEM80Q96HE8 168 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 CHST5Q9GZS9 411 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 RASSF4Q9H2L5 321 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 SMURF1Q9HCE7 757 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 ERVK-18Q9QC07 812 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 KAAG1Q9UBP8 84 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 CLN8Q9UBY8 286 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 CLEC2DQ9UHP7 191 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 PSORS1C1Q9UIG5 152 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 EXOSC1Q9Y3B2 195 aaKnown RBP13.08□□□□□ -0.32
ACTB-206ENST00000443528 INSIG2Q9Y5U4 225 aa13.08□□□□□ -0.32
ACTB-206ENST00000443528 CUBNO60494 3623 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 LOC105371242A0A075B767 164 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 A0A1B0GW55 424 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 J3QT63 122 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 SYNGR1O43759 233 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 ZFPL1O95159 310 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 DUX4L2P0CJ85 424 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 DUX4L3P0CJ86 424 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 DUX4L4P0CJ87 422 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 DUX4L5P0CJ88 424 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 DUX4L6P0CJ89 424 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 DUX4L7P0CJ90 424 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 PIPP12273 146 aaPredicted RBP13.07□□□□□ -0.32
ACTB-206ENST00000443528 SRP14P37108 136 aaKnown RBP13.07□□□□□ -0.32
ACTB-206ENST00000443528 HAAOP46952 286 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 ST3GAL4Q11206 333 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 STUMQ69YW2 141 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 DUX4L9Q6RFH8 374 aaPredicted RBP13.07□□□□□ -0.32
ACTB-206ENST00000443528 ZNF573Q86YE8 665 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 ZNF676Q8N7Q3 588 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 BPIFB6Q8NFQ5 453 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 OR5T2Q8NGG2 359 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 ZNF671Q8TAW3 534 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 TRMT10AQ8TBZ6 339 aaKnown RBP13.07□□□□□ -0.32
ACTB-206ENST00000443528 NPRL2Q8WTW4 380 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 PP6455Q8WZ26 134 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 C12orf43Q96C57 262 aaKnown RBP13.07□□□□□ -0.32
ACTB-206ENST00000443528 CCL13Q99616 98 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 PDCD1LG2Q9BQ51 273 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 C7orf69Q9H7B7 122 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 SNTG1Q9NSN8 517 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 CNOT2Q9NZN8 540 aaKnown RBP13.07□□□□□ -0.32
ACTB-206ENST00000443528 DUX4Q9UBX2 424 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 OR5V1Q9UGF6 321 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 HHLA2Q9UM44 414 aa13.07□□□□□ -0.32
ACTB-206ENST00000443528 IGKV1-27A0A075B6S5 117 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 IGHV2-70DA0A0C4DH43 119 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 IGKV1-9A0A0C4DH69 117 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 FAM230AA0A1W2PPH8 454 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 EFCAB10A6NFE3 127 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 TMEM212A6NML5 194 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 GATBO75879 557 aaKnown RBP13.06□□□□□ -0.32
ACTB-206ENST00000443528 ATP6V1G2O95670 118 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 TFF1P04155 84 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 ADRA2CP18825 462 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 GLRA1P23415 457 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 MPZP25189 248 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 NPY4RP50391 375 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 RIPK1Q13546 671 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 ATPAF1Q5TC12 328 aaPredicted RBP13.06□□□□□ -0.32
ACTB-206ENST00000443528 TMPRSS11AQ6ZMR5 421 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 ANGPTL5Q86XS5 388 aa13.06□□□□□ -0.32
ACTB-206ENST00000443528 CALHM1Q8IU99 346 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms