RNA–Protein interactions for RNA: ENST00000427112.6

USP40-203, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP40, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-203ENST00000427112 MITD1Q8WV92 249 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 ASB10Q8WXI3 467 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 PAPOLGQ9BWT3 736 aaKnown RBP7.62□□□□□ -1.19
USP40-203ENST00000427112 SLC19A3Q9BZV2 496 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 RAB33BQ9H082 229 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 ZNF700Q9H0M5 742 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 BARX1Q9HBU1 254 aaPredicted RBP7.62□□□□□ -1.19
USP40-203ENST00000427112 MGAQ8IWI9 3026 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 A0A1W2PPE2 198 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 ZNF727A8MUV8 499 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 ALG1L2C9J202 215 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 K7EPK0 472 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 CDC14BO60729 498 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 TRAPPC6AO75865 159 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 DRD1P21728 446 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 CAV2P51636 162 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 GABREP78334 506 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 NHLH2Q02577 135 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 PIGYQ3MUY2 71 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 MOB3CQ70IA8 216 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 SVBPQ8N300 66 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 FAM71E2Q8N5Q1 922 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 EID2Q8N6I1 236 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 OR1N1Q8NGS0 311 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 OR6S1Q8NH40 331 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 ASB17Q8WXJ9 295 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 SLC25A32Q9H2D1 315 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 SMOC1Q9H4F8 434 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 UQCC1Q9NVA1 299 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 IGKV1-9A0A0C4DH69 117 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 BET1O15155 118 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 TSPAN2O60636 221 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 FCGR2CP31995 323 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 LTBRP36941 435 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 PHYHD1Q5SRE7 291 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 YRDCQ86U90 279 aaKnown RBP7.62□□□□□ -1.19
USP40-203ENST00000427112 ARHGEF39Q8N4T4 335 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 SPACA1Q9HBV2 294 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 FBXL17Q9UF56 701 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 GLS2Q9UI32 602 aa7.62□□□□□ -1.19
USP40-203ENST00000427112 MCTS1Q9ULC4 181 aaKnown RBP7.62□□□□□ -1.19
USP40-203ENST00000427112 SPTA1P02549 2419 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 OR2F2O95006 317 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 PTGFRP43088 359 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 MTCP1P56278 107 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 OR2F1Q13607 317 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 COTL1Q14019 142 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 KISS1Q15726 138 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 ZNF674Q2M3X9 581 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 C4orf17Q53FE4 359 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 TEX30Q5JUR7 227 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 ZNF468Q5VIY5 522 aaPredicted RBP7.61□□□□□ -1.19
USP40-203ENST00000427112 LYZL2Q7Z4W2 148 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 NAXDQ8IW45 347 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 PHOSPHO2Q8TCD6 241 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 C15orf40Q8WUR7 153 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 RGCCQ9H4X1 137 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 FAM206AQ9NX38 181 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 PADI1Q9ULC6 663 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 FLVCR1Q9Y5Y0 555 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 MED13LQ71F56 2210 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 SIGLEC6O43699 453 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 CST7O76096 145 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 DXOO77932 396 aaKnown RBP7.61□□□□□ -1.19
USP40-203ENST00000427112 LCATP04180 440 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 BMP5P22003 454 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 RPS18P62269 152 aaKnown RBP7.61□□□□□ -1.19
USP40-203ENST00000427112 HAGHQ16775 308 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 HLA-BQ31612 363 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 GUSBP11Q6P575 273 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 TMEM182Q6ZP80 229 aaPredicted RBP7.61□□□□□ -1.19
USP40-203ENST00000427112 FAM213BQ8TBF2 198 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 SDHAF3Q9NRP4 125 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 P4HTMQ9NXG6 502 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 WASF3Q9UPY6 502 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 IGHV1OR21-1A0A087WYE8 117 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 HMGB3O15347 200 aaKnown RBP7.61□□□□□ -1.19
USP40-203ENST00000427112 MBTPS2O43462 519 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 AQP8O94778 261 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 CSTBP04080 98 aaKnown RBP7.61□□□□□ -1.19
USP40-203ENST00000427112 HPNP05981 417 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 B4GALT1P15291 398 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 PTGER4P35408 488 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 SLC6A8P48029 635 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 SUPT4H1P63272 117 aaKnown RBP7.61□□□□□ -1.19
USP40-203ENST00000427112 HOXA4Q00056 320 aaPredicted RBP7.61□□□□□ -1.19
USP40-203ENST00000427112 DHODHQ02127 395 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 FABP9Q0Z7S8 132 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 UBE2V2Q15819 145 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 SNAI3Q3KNW1 292 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 FAM166AQ6J272 317 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 BEND4Q6ZU67 534 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 LILRB2Q8N423 598 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 AQP3Q92482 292 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 MRPL38Q96DV4 380 aaKnown RBP7.61□□□□□ -1.19
USP40-203ENST00000427112 CFHR5Q9BXR6 569 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 OR10A2Q9H208 303 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 CRLF2Q9HC73 371 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 OBP2AQ9NY56 170 aa7.61□□□□□ -1.19
USP40-203ENST00000427112 PLA2G2EQ9NZK7 142 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms