RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 FAM216BQ8N7L0 139 aa16.84■□□□□ 0.29
GTF3A-202ENST00000419181 ZFAND2BQ8WV99 257 aa16.84■□□□□ 0.29
GTF3A-202ENST00000419181 AQP3Q92482 292 aa16.84■□□□□ 0.29
GTF3A-202ENST00000419181 RDH12Q96NR8 316 aa16.84■□□□□ 0.29
GTF3A-202ENST00000419181 DNTTIP1Q9H147 329 aa16.84■□□□□ 0.29
GTF3A-202ENST00000419181 GPR173Q9NS66 373 aa16.84■□□□□ 0.29
GTF3A-202ENST00000419181 SMPD3Q9NY59 655 aaPredicted RBP16.84■□□□□ 0.29
GTF3A-202ENST00000419181 ZNF69Q9UC07 566 aa16.84■□□□□ 0.29
GTF3A-202ENST00000419181 A0A1B0GVI7 797 aa16.83■□□□□ 0.28
GTF3A-202ENST00000419181 A6NIN4 97 aa16.83■□□□□ 0.28
GTF3A-202ENST00000419181 SYT7O43581 403 aa16.83■□□□□ 0.28
GTF3A-202ENST00000419181 LIPFP07098 398 aa16.83■□□□□ 0.28
GTF3A-202ENST00000419181 IGHV4-38-2P0DP08 117 aa16.83■□□□□ 0.28
GTF3A-202ENST00000419181 DBTP11182 482 aaKnown RBP16.83■□□□□ 0.28
GTF3A-202ENST00000419181 FGF12P61328 243 aa16.83■□□□□ 0.28
GTF3A-202ENST00000419181 HAGHLQ6PII5 290 aaPredicted RBP16.83■□□□□ 0.28
GTF3A-202ENST00000419181 FGFRL1Q8N441 504 aa16.83■□□□□ 0.28
GTF3A-202ENST00000419181 OR5T2Q8NGG2 359 aa16.83■□□□□ 0.28
GTF3A-202ENST00000419181 Q96MT0 163 aa16.83■□□□□ 0.28
GTF3A-202ENST00000419181 SNTG1Q9NSN8 517 aa16.83■□□□□ 0.28
GTF3A-202ENST00000419181 PQLC2LA1A4F0 135 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 ANKRD61A6NGH8 418 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 ECDO95905 644 aaPredicted RBP16.82■□□□□ 0.28
GTF3A-202ENST00000419181 PLATP00750 562 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 UBCP0CG48 685 aaKnown RBP16.82■□□□□ 0.28
GTF3A-202ENST00000419181 GLRA1P23415 457 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 TGM4P49221 684 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 OR12D2P58182 307 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 FDX2Q6P4F2 183 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 BTN2A1Q7KYR7 527 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 PNLDC1Q8NA58 520 aaKnown RBP16.82■□□□□ 0.28
GTF3A-202ENST00000419181 CCDC54Q8NEL0 328 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 OR2G2Q8NGZ5 317 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 ANGPTL6Q8NI99 470 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 ZNF671Q8TAW3 534 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 APH1BQ8WW43 257 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 ST8SIA4Q92187 359 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 JMJD8Q96S16 334 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 PLEKHA1Q9HB21 404 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 NLKQ9UBE8 527 aa16.82■□□□□ 0.28
GTF3A-202ENST00000419181 TRAV40A0A0B4J280 105 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 LOC107986453A0A1B0GWG9 222 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 ZNF879B4DU55 563 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 H3BSH0 61 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 IGHA1P01876 353 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 HAAOP46952 286 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 ACTA2P62736 377 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 ACTG2P63267 376 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 RCN1Q15293 331 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 ZNF788Q6ZQV5 615 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 C9orf139Q6ZV77 190 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 ZNF573Q86YE8 665 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 BCL6BQ8N143 479 aaPredicted RBP16.81■□□□□ 0.28
GTF3A-202ENST00000419181 GAFA1Q96PS6 74 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 ADI1Q9BV57 179 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 AMBNQ9NP70 447 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 ESM1Q9NQ30 184 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 RPUSD1Q9UJJ7 312 aaKnown RBP16.81■□□□□ 0.28
GTF3A-202ENST00000419181 MYRFQ9Y2G1 1151 aa16.81■□□□□ 0.28
GTF3A-202ENST00000419181 IGHV3OR16-10A0A075B7F0 116 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 NKX6-3A6NJ46 265 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 OR2AT4A6NND4 320 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 J3QT63 122 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 GPR37O15354 613 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 NDUFB3O43676 98 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 SELLP14151 372 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 MMP9P14780 707 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 NANOS3P60323 173 aaKnown RBP16.8■□□□□ 0.28
GTF3A-202ENST00000419181 RAB40BQ12829 278 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 IKZF1Q13422 519 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 LRRC36Q1X8D7 754 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 RDH10Q8IZV5 341 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.8■□□□□ 0.28
GTF3A-202ENST00000419181 POC1AQ8NBT0 407 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 ZNF555Q8NEP9 628 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 TMIGD2Q96BF3 282 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 PELI1Q96FA3 418 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 C4orf36Q96KX1 117 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 CHST5Q9GZS9 411 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 C8orf4Q9NR00 106 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 MRPS18AQ9NVS2 196 aaKnown RBP16.8■□□□□ 0.28
GTF3A-202ENST00000419181 FRRS1LQ9P0K9 344 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 ZNF222Q9UK12 451 aa16.8■□□□□ 0.28
GTF3A-202ENST00000419181 IGKV1D-17A0A075B6S4 117 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 SIGLEC5O15389 551 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 SYNGR1O43759 233 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 FADS2O95864 444 aaKnown RBP16.79■□□□□ 0.28
GTF3A-202ENST00000419181 TFF1P04155 84 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 ISG15P05161 165 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 SFTPBP07988 381 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 PGA5P0DJD9 388 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 MPZP25189 248 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 PEX2P28328 305 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 IL13RA1P78552 427 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 GALEQ14376 348 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 UBE2V2Q15819 145 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 LRRC10Q5BKY1 277 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 LPCAT4Q643R3 524 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 PACRGLQ8N7B6 248 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 SIGLECL1Q8N7X8 197 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms