RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PRSS41Q7RTY9 318 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 FBXL14Q8N1E6 418 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 ADAD2Q8NCV1 583 aaKnown RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 IFI44Q8TCB0 444 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 DOK5Q9P104 306 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 IGHV3-43A0A0B4J1X8 118 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 CDRT15L2A8MXV6 281 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 RER1O15258 196 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 IGHV3-43DP0DP04 118 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 ZBTB25P24278 435 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 FGF9P31371 208 aaPredicted RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 CLN3Q13286 438 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 TMEM183BQ1AE95 376 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 THSD4Q6ZMP0 1018 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 ZDHHC22Q8N966 263 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 CHAC2Q8WUX2 184 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 SNX22Q96L94 193 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 CMTM3Q96MX0 182 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 MIOXQ9UGB7 285 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 HS3ST3A1Q9Y663 406 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 POMT1Q9Y6A1 747 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 KCNE1BA0A087WTH5 132 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 KLRC4-KLRK1H3BQV0 150 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 CDC42EP2O14613 210 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 CDC14BO60729 498 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 CDKN2AP42771 156 aaKnown RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 SSBP1Q04837 148 aaKnown RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 INPP5JQ15735 1006 aaPredicted RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 Q6ZN92 141 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 OR10AD1Q8NGE0 317 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 SLC25A43Q8WUT9 341 aaPredicted RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 RAB18Q9NP72 206 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 IL17BQ9UHF5 180 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 FRG2CA6NGY1 282 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 HIST1H1DP16402 221 aaKnown RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 CCR2P41597 374 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 CNN1P51911 297 aaKnown RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 KIAA0040Q15053 153 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 BTNL3Q6UXE8 466 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 FA2HQ7L5A8 372 aa10.78□□□□□ -0.68
UBR4-205ENST00000417040 LSM2Q9Y333 95 aaKnown RBP10.78□□□□□ -0.68
UBR4-205ENST00000417040 HPXP02790 462 aa10.77□□□□□ -0.68
UBR4-205ENST00000417040 ZNF25P17030 456 aaPredicted RBP10.77□□□□□ -0.68
UBR4-205ENST00000417040 PPIAP62937 165 aaKnown RBP10.77□□□□□ -0.68
UBR4-205ENST00000417040 GALMQ96C23 342 aa10.77□□□□□ -0.68
UBR4-205ENST00000417040 AKAP11Q9UKA4 1901 aa10.77□□□□□ -0.68
UBR4-205ENST00000417040 A0A1W2PPE2 198 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 IGHEP01854 428 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 TMEM33P57088 247 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 BPIFB3P59826 476 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 C19orf57Q0VDD7 668 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 KISS1Q15726 138 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 DGAT2L6Q6ZPD8 337 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 MFRPQ9BY79 579 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 POLDIP2Q9Y2S7 368 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 TJP1Q07157 1748 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 A0A0B4J2E0 115 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 A0A1B0GX12 115 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 PEX11BO96011 259 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 CRYBA1P05813 215 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 NHLH1Q02575 133 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 NHLH2Q02577 135 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 FZD2Q14332 565 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 RPEL1Q2QD12 228 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 ZNF880Q6PDB4 577 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 SPPL3Q8TCT6 385 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 PACRGQ96M98 296 aaPredicted RBP10.77□□□□□ -0.69
UBR4-205ENST00000417040 COMMD5Q9GZQ3 224 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 SLC2A9Q9NRM0 540 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 CA10Q9NS85 328 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 ATP23Q9Y6H3 246 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 SELEP16581 610 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 MDKP21741 143 aaPredicted RBP10.77□□□□□ -0.69
UBR4-205ENST00000417040 ARR3P36575 388 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 OR4D11Q8NGI4 311 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 ASB13Q8WXK3 278 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 CORO2AQ92828 525 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 WNT2BQ93097 391 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 HLA-CQ95604 372 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 SIT1Q9Y3P8 196 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 A0A1B0GTQ1 180 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 MAP1LC3B2A6NCE7 125 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 RNF224P0DH78 156 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 B2MP61769 119 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 DLK1P80370 383 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 ZNF117Q03924 483 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 SLC38A11Q08AI6 406 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 COTL1Q14019 142 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 TECTBQ96PL2 329 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 C19orf43Q9BQ61 176 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 GPR87Q9BY21 358 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 MAP1LC3BQ9GZQ8 125 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 LPAR3Q9UBY5 353 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 ERRFI1Q9UJM3 462 aaPredicted RBP10.77□□□□□ -0.69
UBR4-205ENST00000417040 ZMIZ1Q9ULJ6 1067 aa10.77□□□□□ -0.69
UBR4-205ENST00000417040 EVPLQ92817 2033 aa10.76□□□□□ -0.69
UBR4-205ENST00000417040 RBFOX3A6NFN3 312 aa10.76□□□□□ -0.69
UBR4-205ENST00000417040 CLDN34H7C241 214 aa10.76□□□□□ -0.69
UBR4-205ENST00000417040 IGHA2P01877 340 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms