RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 UQCC3Q6UW78 93 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 MOB1BQ7L9L4 216 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 ADPRHL1Q8NDY3 354 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 HRKO00198 91 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 SFT2D2O95562 160 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 FABP6P51161 128 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF808Q8N4W9 903 aaPredicted RBP10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 SF3B5Q9BWJ5 86 aaKnown RBP10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 NXF2Q9GZY0 626 aaKnown RBP10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF768Q9H5H4 540 aaKnown RBP10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 PARP14Q460N5 1801 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 OR2M5A3KFT3 312 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 MKRN2OSH3BPM6 223 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 H7BYZ3 331 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 PLA2G10O15496 165 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 GCM2O75603 506 aaPredicted RBP10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 PGA3P0DJD8 388 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 ETFDHQ16134 617 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 OR5AP2Q8NGF4 316 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 OR10D3Q8NH80 312 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 ZMAT5Q9UDW3 170 aaKnown RBP10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 CACNA1IQ9P0X4 2223 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 SCN4AP35499 1836 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 PDCD6O75340 191 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 MT-CO3P00414 261 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 CST4P01036 141 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 CD1AP06126 327 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 P2RX3P56373 397 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 TMEM52Q8NDY8 209 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 OR1J1Q8NGS3 322 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 OR6S1Q8NH40 331 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 GALMQ96C23 342 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 CMBLQ96DG6 245 aa10.55□□□□□ -0.72
DEPDC1-201ENST00000370966 TRIM77I1YAP6 450 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 MPZL1O95297 269 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 NTN1O95631 604 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 MMP16P51512 607 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 HLXQ14774 488 aaPredicted RBP10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 MAFAQ8NHW3 353 aaPredicted RBP10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 ANGPTL6Q8NI99 470 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 M1APQ8TC57 530 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 C10orf35Q96D05 121 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 LIN37Q96GY3 246 aaPredicted RBP10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 C9orf170A2RU37 121 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 TGOLN2O43493 480 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 CDC14BO60729 498 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 C1QCP02747 245 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 IGHV4-34P06331 123 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF79Q15937 498 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF774Q6NX45 483 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 IL34Q6ZMJ4 242 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 KISS1RQ969F8 398 aaPredicted RBP10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 PHYHIPLQ96FC7 376 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF75AQ96N20 296 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 ACTR3CQ9C0K3 210 aaPredicted RBP10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 MED9Q9NWA0 146 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 GNG13Q9P2W3 67 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 BRWD3Q6RI45 1802 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 A0A1B0GTQ1 180 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 COX5AP20674 150 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 KIAA0141Q14154 515 aaPredicted RBP10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 PABPC1L2AQ5JQF8 200 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 LCN15Q6UWW0 184 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 THNSL2Q86YJ6 484 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 SCCPDHQ8NBX0 429 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 SLC35E1Q96K37 410 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 PRSS27Q9BQR3 290 aa10.54□□□□□ -0.72
DEPDC1-201ENST00000370966 IGHV3-64DA0A0J9YX35 117 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 PPP5D1E7EU14 171 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 GPM6AP51674 278 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 SURF2Q15527 256 aaPredicted RBP10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 NTNG2Q96CW9 530 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 MAP6Q96JE9 813 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 MAGT1Q9H0U3 335 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 PSENENQ9NZ42 101 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 PILRAQ9UKJ1 303 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 RBBP6Q7Z6E9 1792 aaKnown RBP10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF891A8MT65 544 aaPredicted RBP10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF727A8MUV8 499 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 DCTN6O00399 190 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 OR2C1O95371 312 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 BGLAPP02818 100 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 FABP1P07148 127 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 LIMS1P48059 325 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 LGALS4P56470 323 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 ZNF239Q16600 458 aaKnown RBP10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 LHX9Q9NQ69 397 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 LSM2Q9Y333 95 aaKnown RBP10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 PIKFYVEQ9Y2I7 2098 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 DSPPQ9NZW4 1301 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 TMEM30CPA0ZSE6 113 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 MPC2O95563 127 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 NGFRP08138 427 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 HAGHQ16775 308 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 PINX1Q96BK5 328 aaKnown RBP10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 TAAR6Q96RI8 345 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 C20orf24Q9BUV8 137 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 DUSP15Q9H1R2 295 aaPredicted RBP10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 SIPA1L1O43166 1804 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms