RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 TMEM210A6NLX4 147 aa22.97■■□□□ 1.27
SSBP4-202ENST00000348495 PTGFRP43088 359 aa22.97■■□□□ 1.27
SSBP4-202ENST00000348495 RAB11BQ15907 218 aa22.97■■□□□ 1.27
SSBP4-202ENST00000348495 ANGPTL5Q86XS5 388 aa22.97■■□□□ 1.27
SSBP4-202ENST00000348495 OR5D18Q8NGL1 313 aa22.97■■□□□ 1.27
SSBP4-202ENST00000348495 DIRC2Q96SL1 478 aa22.97■■□□□ 1.27
SSBP4-202ENST00000348495 CBLN4Q9NTU7 201 aa22.97■■□□□ 1.27
SSBP4-202ENST00000348495 C14orf119Q9NWQ9 140 aa22.97■■□□□ 1.27
SSBP4-202ENST00000348495 NKIRAS2Q9NYR9 191 aa22.97■■□□□ 1.27
SSBP4-202ENST00000348495 A0A0B4J203 849 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 CD8AP01732 235 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 ZNF404Q494X3 552 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 C11orf71Q6IPW1 123 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 ZNF573Q86YE8 665 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 PNLDC1Q8NA58 520 aaKnown RBP22.96■■□□□ 1.27
SSBP4-202ENST00000348495 AP3S1Q92572 193 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 LIN7BQ9HAP6 207 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 A3GALT2U3KPV4 340 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 ARFGEF3Q5TH69 2177 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 BAHCC1Q9P281 2608 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 A0A075B6Q4 140 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 LRP5LA4QPB2 252 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 CD55P08174 381 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 SOD3P08294 240 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 HAAOP46952 286 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 SNRPD2P62316 118 aaKnown RBP22.96■■□□□ 1.27
SSBP4-202ENST00000348495 MZT1Q08AG7 82 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 ZNF154Q13106 437 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 PDZK1IP1Q13113 114 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 AGAP6Q5VW22 663 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 C1QL2Q7Z5L3 287 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 ZNF295-AS1Q8N0V1 137 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 CELF2-AS1Q8N7Q2 184 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 C1orf147Q96MC9 270 aaPredicted RBP22.96■■□□□ 1.27
SSBP4-202ENST00000348495 TLNRD1Q9H1K6 362 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 MS4A5Q9H3V2 200 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 PLEKHF2Q9H8W4 249 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 ABRACLQ9P1F3 81 aa22.96■■□□□ 1.27
SSBP4-202ENST00000348495 MPZP25189 248 aa22.95■■□□□ 1.26
SSBP4-202ENST00000348495 COL8A1P27658 744 aa22.95■■□□□ 1.26
SSBP4-202ENST00000348495 DYNC1I2Q13409 638 aaKnown RBP22.95■■□□□ 1.26
SSBP4-202ENST00000348495 P2RY14Q15391 338 aa22.95■■□□□ 1.26
SSBP4-202ENST00000348495 ASCL4Q6XD76 172 aa22.95■■□□□ 1.26
SSBP4-202ENST00000348495 MCFD2Q8NI22 146 aa22.95■■□□□ 1.26
SSBP4-202ENST00000348495 TNFAIP8L1Q8WVP5 186 aa22.95■■□□□ 1.26
SSBP4-202ENST00000348495 CLEC4MQ9H2X3 399 aaPredicted RBP22.95■■□□□ 1.26
SSBP4-202ENST00000348495 MRPS28Q9Y2Q9 187 aaKnown RBP22.95■■□□□ 1.26
SSBP4-202ENST00000348495 DOPEY2Q9Y3R5 2298 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 SPRNQ5BIV9 151 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 C11orf53Q8IXP5 236 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 ZCCHC24Q8N2G6 241 aaKnown RBP22.94■■□□□ 1.26
SSBP4-202ENST00000348495 ACOT12Q8WYK0 555 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 FAM3DQ96BQ1 224 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 MEGF10Q96KG7 1140 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 OR2V2Q96R30 315 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 PKIBQ9C010 78 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 UBTD1Q9HAC8 227 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 DYNLRB1Q9NP97 96 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 IL19Q9UHD0 177 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 DCHS2Q6V1P9 2916 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 PAHP00439 452 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 CALCBP10092 127 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 SNRPBP14678 240 aaKnown RBP22.94■■□□□ 1.26
SSBP4-202ENST00000348495 POU3F4P49335 361 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 HAGHLQ6PII5 290 aaPredicted RBP22.94■■□□□ 1.26
SSBP4-202ENST00000348495 ZSCAN4Q8NAM6 433 aaPredicted RBP22.94■■□□□ 1.26
SSBP4-202ENST00000348495 SCCPDHQ8NBX0 429 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 OR51D1Q8NGF3 324 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 TBC1D15Q8TC07 691 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 TRAF4Q9BUZ4 470 aaPredicted RBP22.94■■□□□ 1.26
SSBP4-202ENST00000348495 MRI1Q9BV20 369 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 OR5V1Q9UGF6 321 aa22.94■■□□□ 1.26
SSBP4-202ENST00000348495 FBXO9Q9UK97 447 aaPredicted RBP22.94■■□□□ 1.26
SSBP4-202ENST00000348495 SPRY1O43609 319 aaPredicted RBP22.93■■□□□ 1.26
SSBP4-202ENST00000348495 TMEM225BP0DP42 221 aa22.93■■□□□ 1.26
SSBP4-202ENST00000348495 GATA4P43694 442 aa22.93■■□□□ 1.26
SSBP4-202ENST00000348495 PPOXP50336 477 aa22.93■■□□□ 1.26
SSBP4-202ENST00000348495 SCAND1P57086 179 aa22.93■■□□□ 1.26
SSBP4-202ENST00000348495 TNFAIP6P98066 277 aaPredicted RBP22.93■■□□□ 1.26
SSBP4-202ENST00000348495 FAM209AQ5JX71 171 aa22.93■■□□□ 1.26
SSBP4-202ENST00000348495 PRAMEF6Q5VXH4 476 aa22.93■■□□□ 1.26
SSBP4-202ENST00000348495 AWAT2Q6E213 333 aa22.93■■□□□ 1.26
SSBP4-202ENST00000348495 GLIPR1L1Q6UWM5 242 aa22.93■■□□□ 1.26
SSBP4-202ENST00000348495 PXT1Q8NFP0 134 aa22.93■■□□□ 1.26
SSBP4-202ENST00000348495 AQP3Q92482 292 aa22.93■■□□□ 1.26
SSBP4-202ENST00000348495 MMP27Q9H306 513 aa22.93■■□□□ 1.26
SSBP4-202ENST00000348495 IGKV1-12A0A0C4DH73 117 aa22.92■■□□□ 1.26
SSBP4-202ENST00000348495 IGHV3-64DA0A0J9YX35 117 aa22.92■■□□□ 1.26
SSBP4-202ENST00000348495 J3QT63 122 aa22.92■■□□□ 1.26
SSBP4-202ENST00000348495 BPNT1O95861 308 aa22.92■■□□□ 1.26
SSBP4-202ENST00000348495 PLATP00750 562 aa22.92■■□□□ 1.26
SSBP4-202ENST00000348495 IGKV1D-12P01611 117 aa22.92■■□□□ 1.26
SSBP4-202ENST00000348495 GRPP07492 148 aa22.92■■□□□ 1.26
SSBP4-202ENST00000348495 TNFSF4P23510 183 aa22.92■■□□□ 1.26
SSBP4-202ENST00000348495 SRP9P49458 86 aaKnown RBP22.92■■□□□ 1.26
SSBP4-202ENST00000348495 QRFPP83859 136 aa22.92■■□□□ 1.26
SSBP4-202ENST00000348495 MPPED2Q15777 294 aa22.92■■□□□ 1.26
SSBP4-202ENST00000348495 C2orf76Q3KRA6 126 aa22.92■■□□□ 1.26
SSBP4-202ENST00000348495 SLC25A26Q70HW3 274 aa22.92■■□□□ 1.26
SSBP4-202ENST00000348495 SAXO1Q8IYX7 474 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms