RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 MCRIP1C9JLW8 97 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 AIPO00170 330 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 CREBL2O60519 120 aaPredicted RBP12.72□□□□□ -0.37
CXCL12-201ENST00000343575 HPXP02790 462 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 SERPINA5P05154 406 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 FGF2P09038 288 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 UBCP0CG48 685 aaKnown RBP12.72□□□□□ -0.37
CXCL12-201ENST00000343575 HOXB1P14653 301 aaPredicted RBP12.72□□□□□ -0.37
CXCL12-201ENST00000343575 PPP3CBP16298 524 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 ACHEP22303 614 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 CCL1P22362 96 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 MNDAP41218 407 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 FAM27E3Q08E93 113 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 BTN1A1Q13410 526 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 TMEM244Q5VVB8 128 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 BHLHA15Q7RTS1 189 aaPredicted RBP12.72□□□□□ -0.37
CXCL12-201ENST00000343575 MRGPRGQ86SM5 289 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 RND1Q92730 232 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 BBC3Q96PG8 261 aaPredicted RBP12.72□□□□□ -0.37
CXCL12-201ENST00000343575 GFI1Q99684 422 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 PIGMQ9H3S5 423 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 HRASLSQ9HDD0 168 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 GPR84Q9NQS5 396 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 HHLA2Q9UM44 414 aa12.72□□□□□ -0.37
CXCL12-201ENST00000343575 MRPS7Q9Y2R9 242 aaKnown RBP12.72□□□□□ -0.37
CXCL12-201ENST00000343575 ZFYVE26Q68DK2 2539 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 TRAV8-7A0A075B6U6 113 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 EEF1E1-BLOC1S5C9J1V9 151 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 ATXN7O15265 892 aaPredicted RBP12.71□□□□□ -0.37
CXCL12-201ENST00000343575 ALDOBP05062 364 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 NMBP08949 121 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 ATF1P18846 271 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 S100A11P31949 105 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 CCKARP32238 428 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 CCDC36Q8IYA8 594 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 PLPP7Q8NBV4 271 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 BEST4Q8NFU0 473 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 ZNF671Q8TAW3 534 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 SGK3Q96BR1 496 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 LINC00052Q96N35 136 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 C1QTNF5Q9BXJ0 243 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 COQ3Q9NZJ6 369 aa12.71□□□□□ -0.37
CXCL12-201ENST00000343575 ESPL1Q14674 2120 aa12.71□□□□□ -0.38
CXCL12-201ENST00000343575 A0A0U1RQV5 110 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 C5orf49A4QMS7 147 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 OR5H1A6NKK0 313 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 AGFG2O95081 481 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 IGKV3-15P01624 115 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 APOC1P02654 83 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 SRMP19623 302 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 RAB3AP20336 220 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 GMFBP60983 142 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 TUSC1Q2TAM9 212 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 TMEM211Q6ICI0 200 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 Q6ZSR3 168 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 C17orf78Q8N4C9 275 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 BVESQ8NE79 360 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 FCAMRQ8WWV6 532 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 RAB40AQ8WXH6 277 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 NANOS1Q8WY41 292 aaKnown RBP12.7□□□□□ -0.38
CXCL12-201ENST00000343575 PGAM5Q96HS1 289 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 IFT46Q9NQC8 304 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 PIPOXQ9P0Z9 390 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 SLC25A15Q9Y619 301 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 CFAP46Q8IYW2 2715 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 A6NIN4 97 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 CCL21O00585 134 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 SNRPBP14678 240 aaKnown RBP12.7□□□□□ -0.38
CXCL12-201ENST00000343575 CBR1P16152 277 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 ADRA2CP18825 462 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 CXCL2P19875 107 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 WNT5AP41221 380 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 UBE2NP61088 152 aaKnown RBP12.7□□□□□ -0.38
CXCL12-201ENST00000343575 SEC61A1P61619 476 aaKnown RBP12.7□□□□□ -0.38
CXCL12-201ENST00000343575 ADORA2A-AS1P86434 159 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 ZNF626Q68DY1 528 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 PDZD9Q8IXQ8 264 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 OR2AE1Q8NHA4 323 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 TSEN15Q8WW01 171 aaKnown RBP12.7□□□□□ -0.38
CXCL12-201ENST00000343575 S100PBPQ96BU1 408 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 ADAT3Q96EY9 351 aaPredicted RBP12.7□□□□□ -0.38
CXCL12-201ENST00000343575 C1QTNF6Q9BXI9 259 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 DNTTIP1Q9H147 329 aa12.7□□□□□ -0.38
CXCL12-201ENST00000343575 HIVEP3Q5T1R4 2406 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 UBE2QL1A1L167 161 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 SYT7O43581 403 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 NGFP01138 241 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 LCATP04180 440 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 PRKACAP17612 351 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 FAUP35544 74 aaKnown RBP12.69□□□□□ -0.38
CXCL12-201ENST00000343575 VEGFCP49767 419 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 IDH3GP51553 393 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-201ENST00000343575 CASP6P55212 293 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 PLP2Q04941 152 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 GK2Q14410 553 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-201ENST00000343575 MPPED2Q15777 294 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 GFOD2Q3B7J2 385 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 GLYATL3Q5SZD4 288 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 LRRTM1Q86UE6 522 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 ZNF101Q8IZC7 436 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms