RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 RBM38Q9H0Z9 239 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 SH2D2AQ9NP31 389 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 RABAC1Q9UI14 185 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 AJAP1Q9UKB5 411 aaPredicted RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 SDK1Q7Z5N4 2213 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 TRAV17A0A0B4J275 112 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 A8MUA0 341 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR13C7P0DN81 318 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 CTRB1P17538 263 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OPRM1P35372 400 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 COL19A1Q14993 1142 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 NCR3LG1Q68D85 454 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 CTRB2Q6GPI1 263 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 TGIF2LXQ8IUE1 241 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 RELL2Q8NC24 303 aaPredicted RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 ARSGQ96EG1 525 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 PEX11GQ96HA9 241 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 MRPL15Q9P015 296 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 ARPC1BO15143 372 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 ZNF44P15621 663 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 HIST1H1DP16402 221 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 FJX1Q86VR8 437 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 VAMP8Q9BV40 100 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 KIAA2026Q5HYC2 2103 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 MEF2CQ06413 473 aaPredicted RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 ZNF383Q8NA42 475 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR5H6Q8NGV6 325 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ADGRL4Q9HBW9 690 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 LIPFP07098 398 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 CNN1P51911 297 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 MRPS34P82930 218 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 HYAL1Q12794 435 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 AADACL3Q5VUY0 350 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 CLECL1Q8IZS7 167 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 OR10G4Q8NGN3 311 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 C7orf34Q96L11 122 aa3.61□□□□□ -1.83
USH2A-201ENST00000307340 ADAT1Q9BUB4 502 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 SEPSECSQ9HD40 501 aaKnown RBP3.61□□□□□ -1.83
USH2A-201ENST00000307340 CCSO14618 274 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 HAAOP46952 286 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 AMBRA1Q9C0C7 1298 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 MLF2Q15773 248 aaPredicted RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 ZNF551Q7Z340 670 aaPredicted RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 OR4C16Q8NGL9 310 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 FYTTD1Q96QD9 318 aaKnown RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 GIMAP2Q9UG22 337 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 NAT8Q9UHE5 227 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 A0A087WWC5 75 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ZNF727A8MUV8 499 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 TNFSF15O95150 251 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 EPPINO95925 133 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 RPS10P46783 165 aaKnown RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 LGALS4P56470 323 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 PIGPP57054 158 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 OR7A5Q15622 319 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 HLA-BQ31612 363 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ZNF600Q6ZNG1 722 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 BHLHE23Q8NDY6 225 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 RXFP4Q8TDU9 374 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 RTN4IP1Q8WWV3 396 aaPredicted RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 PRR11Q96HE9 360 aaPredicted RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 DMRTB1Q96MA1 342 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 TBX5Q99593 518 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CEP290O15078 2479 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 TRBV23-1A0A0A0MS06 115 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 A0A1W2PPC4 97 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 TAPBPO15533 448 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 GPX5O75715 221 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 OR5AL1P0C617 328 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ZNF16P17020 682 aaPredicted RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 CD70P32970 193 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 AAED1Q7RTV5 226 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 REC114Q7Z4M0 266 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 SLC25A33Q9BSK2 321 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 PSMG3Q9BT73 122 aaPredicted RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 TRAV30A0A087WSZ9 112 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 YY2O15391 372 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 GABRG2P18507 467 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 PRKACGP22612 351 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 BRS3P32247 399 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 TMEM268Q5VZI3 342 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CGB2Q6NT52 195 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 BAGE3Q86Y29 109 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 BAGE2Q86Y30 109 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 TMEM25Q86YD3 366 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 OR52N4Q8NGI2 321 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CLDN23Q96B33 292 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 PRDM7Q9NQW5 492 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CLN8Q9UBY8 286 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 VAX2Q9UIW0 290 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 WASHC3Q9Y3C0 194 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 LRRK1Q38SD2 2015 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 A0A1W2PS18 150 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 PITX3O75364 302 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CTAG2O75638 210 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 OR10J1P30954 320 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 PTGDSP41222 190 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CCR2P41597 374 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ZNF136P52737 540 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms