RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 FCGR2CP31995 323 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 GALR1P47211 349 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 EGR3Q06889 387 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 D2HGDHQ8N465 521 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 DUS3LQ96G46 650 aaKnown RBP10.89□□□□□ -0.67
PCF11-201ENST00000298281 TP53RKQ96S44 253 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 DAPP1Q9UN19 280 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 AQP8O94778 261 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 ABLIM3O94929 683 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 DNAL4O96015 105 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 GIPP09681 153 aaPredicted RBP10.89□□□□□ -0.67
PCF11-201ENST00000298281 ZBTB25P24278 435 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 CORO6Q6QEF8 472 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 PAQR9Q6ZVX9 377 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 OR13C6PQ8NH95 151 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 VSIG4Q9Y279 399 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 EXOGQ9Y2C4 368 aaKnown RBP10.89□□□□□ -0.67
PCF11-201ENST00000298281 DOCK6Q96HP0 2047 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 IGHV3-20A0A0C4DH32 117 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 TMEM238LA0A1B0GVL6 79 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 A6NJY4 79 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 TNFRSF1AP19438 455 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 SDHAP31040 664 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 TMEM81Q6P7N7 255 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 DHRS13Q6UX07 377 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 DEFB123Q8N688 67 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 C19orf43Q9BQ61 176 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 IL36GQ9NZH8 169 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 COA3Q9Y2R0 106 aaPredicted RBP10.89□□□□□ -0.67
PCF11-201ENST00000298281 RAXQ9Y2V3 346 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 A0A1W2PNR3 127 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 SELENOFO60613 162 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 TPMTP51580 245 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 SLC38A9Q8NBW4 561 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 ASB16Q96NS5 453 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 ABHD14AQ9BUJ0 271 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 LPAR2Q9HBW0 351 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 NDUFB11Q9NX14 153 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 A0A1B0GUH1 482 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 BRS3P32247 399 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 TMEM183BQ1AE95 376 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 MICBQ29980 383 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 Q6ZPB1 254 aaPredicted RBP10.89□□□□□ -0.67
PCF11-201ENST00000298281 ZNF441Q8N8Z8 693 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 SLC25A46Q96AG3 418 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 GPR87Q9BY21 358 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 POLEQ07864 2286 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 PLPP1O14494 284 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 NOVA1P51513 510 aaKnown RBP10.89□□□□□ -0.67
PCF11-201ENST00000298281 TMEM267Q0VDI3 215 aaPredicted RBP10.89□□□□□ -0.67
PCF11-201ENST00000298281 OR1C1Q15619 314 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 ZNF547Q8IVP9 402 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 OR13H1Q8NG92 308 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 OR8A1Q8NGG7 326 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 ZNF502Q8TBZ5 544 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 ZNF426Q9BUY5 554 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 LAT2Q9GZY6 243 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 ZNF71Q9NQZ8 489 aaPredicted RBP10.89□□□□□ -0.67
PCF11-201ENST00000298281 TREM2Q9NZC2 230 aa10.89□□□□□ -0.67
PCF11-201ENST00000298281 HKR1P10072 659 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 CCR6P51684 374 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 ZNF77Q15935 545 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 COX20Q5RI15 118 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.88□□□□□ -0.67
PCF11-201ENST00000298281 LYG1Q8N1E2 194 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 MS4A4AQ96JQ5 239 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 TEAD3Q99594 435 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 TMUB1Q9BVT8 246 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 C7orf72A4D263 438 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 CCR5P51681 352 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 HCCSP53701 268 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 INSM1Q01101 510 aaPredicted RBP10.88□□□□□ -0.67
PCF11-201ENST00000298281 ROM1Q03395 351 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 MBD3L1Q8WWY6 194 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 FREM3P0C091 2139 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 A0A1W2PN81 502 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 PRSS2P07478 247 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 COX6CP09669 75 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 BSGP35613 385 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 CHRNA7P36544 502 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 PNLIPRP2P54317 469 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 TCTAP57738 103 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 DUSP8Q13202 625 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 KCNMB1Q16558 191 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 ARIH2OSQ8N7S6 290 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 ZNF740Q8NDX6 193 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 GPR61Q9BZJ8 451 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 A0A0A6YYJ9 748 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 SS18L1O75177 396 aaPredicted RBP10.88□□□□□ -0.67
PCF11-201ENST00000298281 PPICP45877 212 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 KCNAB1Q14722 419 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 FAM26EQ8N5C1 309 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 NANOGP1Q8N7R0 232 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 OR5AP2Q8NGF4 316 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 EAF1Q96JC9 268 aaPredicted RBP10.88□□□□□ -0.67
PCF11-201ENST00000298281 TRAV39A0A0B4J263 110 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 LOC107984156A0A0G2JMH3 177 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 TO15178 435 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 CEACAM3P40198 252 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 OR2T2Q6IF00 324 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms