RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 SMRP1Q8NCR6 262 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 OR6S1Q8NH40 331 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 GPR31O00270 319 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 PRR35P0CG20 571 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 LIMK1P53667 647 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 TIGD3Q6B0B8 471 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 C4orf45Q96LM5 186 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 PLEKHA2Q9HB19 425 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 UMAD1C9J7I0 102 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 CD3EP07766 207 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 ADGRG7Q96K78 797 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 SLC25A32Q9H2D1 315 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 IGHV3-43A0A0B4J1X8 118 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 IGHV5-10-1A0A0J9YXX1 117 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 ZNF727A8MUV8 499 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 FCGR3BO75015 233 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 TOX4O94842 621 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 MPZL1O95297 269 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 IGHV3-43DP0DP04 118 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 OR3A4PP47883 348 aa15.42■□□□□ 0.06
SHANK1-201ENST00000293441 XKRY2A2RUG3 117 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 TOX3O15405 576 aaPredicted RBP15.41■□□□□ 0.06
SHANK1-201ENST00000293441 FUCA1P04066 466 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 TIGITQ495A1 244 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 H3F3CQ6NXT2 135 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 A0A1W2PRD5 423 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 A0A1W2PRF3 423 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 A0A1W2PRM7 423 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 PIGMQ9H3S5 423 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 ADGRL4Q9HBW9 690 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 PSG11Q9UQ72 335 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 NUDT19A8MXV4 375 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 C1QBP02746 253 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 SIPA1L3O60292 1781 aaPredicted RBP15.41■□□□□ 0.06
SHANK1-201ENST00000293441 SPINK2P20155 84 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 OR2Y1Q8NGV0 311 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 RND1Q92730 232 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 ARHGAP5-AS1Q96IT6 56 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 C5orf67F2Z3F1 127 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 ZXDAP98168 799 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 AKR1E2Q96JD6 320 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 KPTNQ9Y664 436 aa15.41■□□□□ 0.06
SHANK1-201ENST00000293441 TMEM272A0A1B0GTI8 110 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 AQP8O94778 261 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 IGHV3-13P01766 116 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 IGHV3-7P01780 117 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 SULT1A3P0DMM9 295 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 SULT1A4P0DMN0 295 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 CBLN3Q6UW01 205 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 MRGPREQ86SM8 312 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 FAAP24Q9BTP7 215 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 COLQQ9Y215 455 aaPredicted RBP15.4■□□□□ 0.06
SHANK1-201ENST00000293441 LAMB2P55268 1798 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 PPP5D1E7EU14 171 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 IL5P05113 134 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 RRASP10301 218 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 GABRA1P14867 456 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 OPRK1P41145 380 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 PRSS12P56730 875 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 SP6Q3SY56 376 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 CNTRLQ7Z7A1 2325 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 CDK5Q00535 292 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 ZNF239Q16600 458 aaKnown RBP15.4■□□□□ 0.06
SHANK1-201ENST00000293441 A0A1B0GTQ1 180 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 CD80P33681 288 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 AKR1C3P42330 323 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 BTNL3Q6UXE8 466 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 CACFD1Q9UGQ2 172 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 DBX1A6NMT0 343 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 H7BYZ3 331 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 TMEM267Q0VDI3 215 aaPredicted RBP15.4■□□□□ 0.06
SHANK1-201ENST00000293441 KIAA0040Q15053 153 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 FAM122BQ7Z309 247 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 FAM122AQ96E09 287 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 RASL10BQ96S79 203 aa15.4■□□□□ 0.06
SHANK1-201ENST00000293441 PTGFRP43088 359 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 CADM3Q8N126 398 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 OR5AP2Q8NGF4 316 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 RXFP4Q8TDU9 374 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 CXXC4Q9H2H0 198 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 SIRT5Q9NXA8 310 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 SMIM17P0DL12 118 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 CDKN2AP42771 156 aaKnown RBP15.39■□□□□ 0.05
SHANK1-201ENST00000293441 CLDN20P56880 219 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 TMEM56Q96MV1 263 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 AGFG2O95081 481 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 OR10Z1Q8NGY1 313 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 WDR34Q96EX3 536 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 FAM103A1Q9BTL3 118 aaKnown RBP15.39■□□□□ 0.05
SHANK1-201ENST00000293441 ERRFI1Q9UJM3 462 aaPredicted RBP15.39■□□□□ 0.05
SHANK1-201ENST00000293441 TBX19O60806 448 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 ONECUT2O95948 504 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 BMI1P35226 326 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 NTN4Q9HB63 628 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 ICAM5Q9UMF0 924 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 SOX15O60248 233 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 TXNDC12O95881 172 aa15.39■□□□□ 0.05
SHANK1-201ENST00000293441 A0A1B0GTH9 108 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 PRRX1P54821 245 aa15.38■□□□□ 0.05
SHANK1-201ENST00000293441 ZNF141Q15928 474 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms