RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 UHRF2Q96PU4 802 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 SSX3Q99909 188 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 ADAM19Q9H013 955 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 M0R1B8 84 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 GPR31O00270 319 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 ADRB1P08588 477 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 OR8U8P0C7N1 319 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 HLA-DOBP13765 273 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 NANOS3P60323 173 aaKnown RBP14.82□□□□□ -0.04
PHRF1-201ENST00000264555 KLF9Q13886 244 aaPredicted RBP14.82□□□□□ -0.04
PHRF1-201ENST00000264555 CD200R1LQ6Q8B3 271 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 C6orf201Q7Z4U5 140 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 MFRPQ9BY79 579 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 NKX6-2Q9C056 277 aaPredicted RBP14.82□□□□□ -0.04
PHRF1-201ENST00000264555 DICER1Q9UPY3 1922 aaKnown RBP14.82□□□□□ -0.04
PHRF1-201ENST00000264555 SPINK14Q6IE38 97 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 KCNIP4Q6PIL6 250 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 TCEAL7Q9BRU2 100 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 MYOFQ9NZM1 2061 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 hCG_1809904A0A1W2PP81 198 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 A0A1W2PPE2 198 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 A0A1W2PR64 198 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 A0A1W2PRV1 198 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 MKRN2OSH3BPM6 223 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 IL3RAP26951 378 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 ZNF808Q8N4W9 903 aaPredicted RBP14.82□□□□□ -0.04
PHRF1-201ENST00000264555 LIN37Q96GY3 246 aaPredicted RBP14.82□□□□□ -0.04
PHRF1-201ENST00000264555 FAAP24Q9BTP7 215 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 ATPIF1Q9UII2 106 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 PCDHGA9Q9Y5G4 932 aaKnown RBP14.82□□□□□ -0.04
PHRF1-201ENST00000264555 RAB19A4D1S5 217 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 TAGLNQ01995 201 aaKnown RBP14.82□□□□□ -0.04
PHRF1-201ENST00000264555 Q6ZRG5 221 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 ZNF107Q9UII5 783 aaPredicted RBP14.82□□□□□ -0.04
PHRF1-201ENST00000264555 PURGQ9UJV8 347 aaKnown RBP14.82□□□□□ -0.04
PHRF1-201ENST00000264555 NME2P1O60361 137 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 SDHBP21912 280 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 PTAFRP25105 342 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 GPR12P47775 334 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 STARD6P59095 220 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 HTD2P86397 168 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 PRDX4Q13162 271 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 AANATQ16613 207 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 TOR2AQ5JU69 321 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 FAM74A1Q5RGS3 127 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 PRAMEF5Q5TYX0 476 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 PRAMEF6Q5VXH4 476 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 SLC25A45Q8N413 288 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 R4GN57 208 aa14.82□□□□□ -0.04
PHRF1-201ENST00000264555 ENSAO43768 121 aaKnown RBP14.81□□□□□ -0.04
PHRF1-201ENST00000264555 DUS4LO95620 317 aaKnown RBP14.81□□□□□ -0.04
PHRF1-201ENST00000264555 LIFP15018 202 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 NDUFB7P17568 137 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 CRYBA2P53672 197 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 SMIM21Q3B7S5 101 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 AVPI1Q5T686 147 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 AK3Q9UIJ7 227 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 KLHDC2Q9Y2U9 406 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 SPAG17Q6Q759 2223 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 MGAT2Q10469 447 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 FAHD2BQ6P2I3 314 aaPredicted RBP14.81□□□□□ -0.04
PHRF1-201ENST00000264555 CPEB3Q8NE35 698 aaKnown RBP14.81□□□□□ -0.04
PHRF1-201ENST00000264555 OR5AP2Q8NGF4 316 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 FAHD2AQ96GK7 314 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 MAP1BP46821 2468 aaKnown RBP14.81□□□□□ -0.04
PHRF1-201ENST00000264555 PATE3B3GLJ2 98 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 C21orf140B9A014 251 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 HLA-HP01893 362 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 CST2P09228 141 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 IGLV3-21P80748 117 aaPredicted RBP14.81□□□□□ -0.04
PHRF1-201ENST00000264555 PLA1AQ53H76 456 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 HES3Q5TGS1 186 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 RFLNBQ8N5W9 214 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 GVQW1Q8N7I0 195 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 FBXW5Q969U6 566 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 DNPH1O43598 174 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 PDCD6O75340 191 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 IGF2P01344 180 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 PATE4P0C8F1 98 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 PSMB3P49720 205 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 SELENOPP49908 381 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 MRPS24Q96EL2 167 aaKnown RBP14.81□□□□□ -0.04
PHRF1-201ENST00000264555 PIKFYVEQ9Y2I7 2098 aa14.81□□□□□ -0.04
PHRF1-201ENST00000264555 BTBD17A6NE02 478 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 HLXQ14774 488 aaPredicted RBP14.8□□□□□ -0.04
PHRF1-201ENST00000264555 PLPPR5Q32ZL2 321 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 SERTAD4Q9NUC0 356 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 TRIP6Q15654 476 aaKnown RBP14.8□□□□□ -0.04
PHRF1-201ENST00000264555 SPANXN5Q5MJ07 72 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 RPS4Y2Q8TD47 263 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 GDF15Q99988 308 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 HMSDA8MTL9 139 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 OR5M9Q8NGP3 310 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 TGIF2Q9GZN2 237 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 A0A1W2PPH5 198 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 H3BMH7 237 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 M0R296 226 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 LANCL1O43813 399 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 ZNF17P17021 662 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 CD80P33681 288 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms