RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 ZSCAN4Q8NAM6 433 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 ASB13Q8WXK3 278 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 AK3Q9UIJ7 227 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 PPP1R3CQ9UQK1 317 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 IGKV1D-42A0A075B6H8 117 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 LILRA5A6NI73 299 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 SMIM10L1P0DMW3 83 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 SPINK2P20155 84 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 PTAFRP25105 342 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 RAB5CP51148 216 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 MRPL49Q13405 166 aaKnown RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 BATFQ16520 125 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 PRSS54Q6PEW0 395 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 CNEP1R1Q8N9A8 125 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 NOXO1Q8NFA2 376 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 CPT1CQ8TCG5 803 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 SMIM10Q96HG1 83 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 PRRX2Q99811 253 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 NAA60Q9H7X0 242 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 GCM1Q9NP62 436 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 A0A1W2PPC4 97 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 MBTPS2O43462 519 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 PIAS2O75928 621 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 HLA-HP01893 362 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 OR8G2PQ6IF36 304 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 HSD17B13Q7Z5P4 300 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 SLC26A10Q8NG04 563 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 NUBPLQ8TB37 319 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 RTN4IP1Q8WWV3 396 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 GNRHR2Q96P88 292 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 ST3GAL6Q9Y274 331 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 MRPL22Q9NWU5 206 aaKnown RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 TIMM8BQ9Y5J9 83 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 ZFP92A6NM28 416 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 HS3ST1O14792 307 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 DHHO43323 396 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 CDC14BO60729 498 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 MRPL33O75394 65 aaKnown RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 TUSC2O75896 110 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 INSM1Q01101 510 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 KISS1Q15726 138 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 GAB4Q2WGN9 574 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 OR2B11Q5JQS5 317 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 OR51F2Q8NH61 342 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 LHFPL5Q8TAF8 219 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 MRPS24Q96EL2 167 aaKnown RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 OBP2BQ9NPH6 170 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 TRAV20A0A0B4J274 112 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 A0A1W2PQF6 199 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF587BE7ETH6 402 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 ZNHIT1O43257 154 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 SPRY1O43609 319 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 UPK3AO75631 287 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 HPNP05981 417 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 KCNJ3P48549 501 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 RTL6Q6ICC9 239 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 OR1F12Q8NHA8 337 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 ASB10Q8WXI3 467 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 TM4SF19Q96DZ7 209 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 SOSTQ9BQB4 213 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 MOB1AQ9H8S9 216 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 LPAR3Q9UBY5 353 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 AMDHD2Q9Y303 409 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 OR2M5A3KFT3 312 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 HLA-DOBP13765 273 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 MUC1P15941 1255 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 ECH1Q13011 328 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 UQCC3Q6UW78 93 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 TFAP2EQ6VUC0 442 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 OR2I1PQ8NGU4 316 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 DYRK2Q92630 601 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 PLK3Q9H4B4 646 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 TRAPPC2LQ9UL33 140 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 KPTNQ9Y664 436 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 LOC101059948A0A1B0GTJ6 334 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 C2CD4DB7Z1M9 353 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 EIF1BO60739 113 aaKnown RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 MT-ND4LP03901 98 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 FABP1P07148 127 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 GGTLC2Q14390 218 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 GUCA2BQ16661 112 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 OVCH2Q7RTZ1 564 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 RDH5Q92781 318 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 TCEAL7Q9BRU2 100 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 HDHD3Q9BSH5 251 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 RSPO3Q9BXY4 272 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 NPDC1Q9NQX5 325 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-201ENST00000249837 HDGFL3Q9Y3E1 203 aa4.1□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF816-ZNF321PA0A0X1KG74 233 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 LYPD3O95274 346 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 CRYBA1P05813 215 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 RPS4Y1P22090 263 aaKnown RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 LINC01590Q5TEZ4 76 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 MAML2Q8IZL2 1156 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 ISOC2Q96AB3 205 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 FBXO17Q96EF6 278 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 GABRG3Q99928 467 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 MED9Q9NWA0 146 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 STRAPQ9Y3F4 350 aaKnown RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 FOXS1O43638 330 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms