RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 MDFIC2A0A1B0GVS7 189 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 NKX6-3A6NJ46 265 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 OR5B21A6NL26 309 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 PRKYO43930 277 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 CRYBA1P05813 215 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 FASP25445 335 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 EFNB1P98172 346 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 NXNL2Q5VZ03 156 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 METAP1DQ6UB28 335 aaPredicted RBP15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 THAP5Q7Z6K1 395 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 ZDHHC13Q8IUH4 622 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 C8orf46Q8TAG6 207 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 ZNF671Q8TAW3 534 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 TBC1D15Q8TC07 691 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 SSMEM1Q8WWF3 244 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 HPSE2Q8WWQ2 592 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 LHX4Q969G2 390 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 TMIGD2Q96BF3 282 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 PBOV1Q9GZY1 135 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 ZNF696Q9H7X3 374 aa15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 UNKLQ9H9P5 680 aaKnown RBP15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 NUFIP1Q9UHK0 495 aaKnown RBP15.74■□□□□ 0.11
CCDC28A-203ENST00000617445 MTRF1O75570 445 aaKnown RBP15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 IGLV3-1P01715 115 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 MRPL3P09001 348 aaKnown RBP15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 FCGR1AP12314 374 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 GPM6AP51674 278 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 SLX4IPQ5VYV7 408 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 RUSC1-AS1Q66K80 236 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 KDM4DQ6B0I6 523 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 ZNF788Q6ZQV5 615 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 C1orf122Q6ZSJ8 110 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 COMMD2Q86X83 199 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 FAM216BQ8N7L0 139 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 DCTN5Q9BTE1 182 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 OR51I2Q9H344 312 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 MOB1AQ9H8S9 216 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 IKZF2Q9UKS7 526 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 CAB39Q9Y376 341 aaPredicted RBP15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 AP4S1Q9Y587 144 aa15.73■□□□□ 0.11
CCDC28A-203ENST00000617445 ZAR1LA6NP61 321 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 ZNF732B4DXR9 585 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 PSMD9O00233 223 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 AKR7A2O43488 359 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 MELTFP08582 738 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 AMY2BP19961 511 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 CAV3P56539 151 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 GUCA2AQ02747 115 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 PRR31Q5SQ13 230 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 AADACL4Q5VUY2 407 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 ZNF322Q6U7Q0 402 aaPredicted RBP15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 GID4Q8IVV7 300 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 TCEANCQ8N8B7 351 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 OR5T2Q8NGG2 359 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 ANGPTL6Q8NI99 470 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 TMEM163Q8TC26 289 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 OR51E1Q8TCB6 317 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 SEH1LQ96EE3 360 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 DUS3LQ96G46 650 aaKnown RBP15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 GABARAPL1Q9H0R8 117 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 WDR13Q9H1Z4 485 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 GPR84Q9NQS5 396 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 RASL12Q9NYN1 266 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 NLKQ9UBE8 527 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 ENPP5Q9UJA9 477 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 COPS3Q9UNS2 423 aa15.72■□□□□ 0.11
CCDC28A-203ENST00000617445 FAM181BA6NEQ2 426 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 OR2AT4A6NND4 320 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 SIGLEC5O15389 551 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 DHRS3O75911 302 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 ACAA1P09110 424 aaPredicted RBP15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 GLRA1P23415 457 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 EGR3Q06889 387 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 IKZF1Q13422 519 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 C12orf73Q69YU5 71 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 VMO1Q7Z5L0 202 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 LDLRAD3Q86YD5 345 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 OR4F5Q8NH21 305 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 FGF23Q9GZV9 251 aaPredicted RBP15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 BEX1Q9HBH7 125 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 SNTG1Q9NSN8 517 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 CLN6Q9NWW5 311 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 ONECUT1Q9UBC0 465 aa15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 SLC25A10Q9UBX3 287 aaPredicted RBP15.71■□□□□ 0.11
CCDC28A-203ENST00000617445 PKD1L1Q8TDX9 2849 aa15.71■□□□□ 0.1
CCDC28A-203ENST00000617445 A0A1B0GW55 424 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 DHRS7CA6NNS2 312 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 ZNF670-ZNF695F2Z2N8 137 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 NDUFA7O95182 113 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 DUX4L2P0CJ85 424 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 DUX4L3P0CJ86 424 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 DUX4L4P0CJ87 422 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 DUX4L5P0CJ88 424 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 DUX4L6P0CJ89 424 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 DUX4L7P0CJ90 424 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 GMFBP60983 142 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 CXCR4P61073 352 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 ELF3P78545 371 aaPredicted RBP15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 C1orf146Q5VVC0 180 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 DUX4L9Q6RFH8 374 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms