RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 ERGIC3Q9Y282 383 aa11.18□□□□□ -0.62
CTSA-213ENST00000606782 A0A0U1RQV5 110 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 CEACAM18A8MTB9 384 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 E9PI62 339 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 PTBP3O95758 552 aaKnown RBP11.17□□□□□ -0.62
CTSA-213ENST00000606782 CFPP27918 469 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 PSMB10P40306 273 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 PMELP40967 661 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 SEC61A1P61619 476 aaKnown RBP11.17□□□□□ -0.62
CTSA-213ENST00000606782 MFGE8Q08431 387 aaPredicted RBP11.17□□□□□ -0.62
CTSA-213ENST00000606782 MAB21L1Q13394 359 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 ESCO2Q56NI9 601 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 OR2G6Q5TZ20 316 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 ELMOD2Q8IZ81 293 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 BPIFB2Q8N4F0 458 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 OR10AD1Q8NGE0 317 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 OR2G2Q8NGZ5 317 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 Q8TCH9 128 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 HAVCR2Q8TDQ0 301 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 SPRYD4Q8WW59 207 aaPredicted RBP11.17□□□□□ -0.62
CTSA-213ENST00000606782 PGAM5Q96HS1 289 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 PBOV1Q9GZY1 135 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 OR10A2Q9H208 303 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 BRD7Q9NPI1 651 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 ESM1Q9NQ30 184 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 ACOXLQ9NUZ1 547 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 FRRS1LQ9P0K9 344 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 NUFIP1Q9UHK0 495 aaKnown RBP11.17□□□□□ -0.62
CTSA-213ENST00000606782 N6AMT1Q9Y5N5 214 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 AUP1Q9Y679 476 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 MGAM2Q2M2H8 2515 aa11.17□□□□□ -0.62
CTSA-213ENST00000606782 F5H5P2 479 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 LOC110117498-PIK3R3F6TDL0 507 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 OGG1O15527 345 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 XRCC2O43543 280 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 RGS9O75916 674 aaPredicted RBP11.16□□□□□ -0.62
CTSA-213ENST00000606782 IGLV3-1P01715 115 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 TTRP02766 147 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 MT-ND2P03891 347 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 EEF1B2P24534 225 aaKnown RBP11.16□□□□□ -0.62
CTSA-213ENST00000606782 CD200P41217 278 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 TGM4P49221 684 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 CCR9P51686 369 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 GBX2P52951 348 aaPredicted RBP11.16□□□□□ -0.62
CTSA-213ENST00000606782 NANOS3P60323 173 aaKnown RBP11.16□□□□□ -0.62
CTSA-213ENST00000606782 ZNF92Q03936 586 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 ACSM1Q08AH1 577 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 MALLQ13021 153 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 CCDC58Q4VC31 144 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 KLF17Q5JT82 389 aaPredicted RBP11.16□□□□□ -0.62
CTSA-213ENST00000606782 GLYATL3Q5SZD4 288 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 DOK3Q7L591 496 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 FAM220AQ7Z4H9 259 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 C1orf87Q8N0U7 546 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 PRSS35Q8N3Z0 413 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 OR8B12Q8NGG6 310 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 ZNF420Q8TAQ5 688 aaPredicted RBP11.16□□□□□ -0.62
CTSA-213ENST00000606782 RPS4Y2Q8TD47 263 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 GATAD2BQ8WXI9 593 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 ITFG2Q969R8 447 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 LYZL4Q96KX0 146 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 RGCCQ9H4X1 137 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 MOB1AQ9H8S9 216 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 MIOXQ9UGB7 285 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 ZNF391Q9UJN7 358 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 NUP50Q9UKX7 468 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 SLC22A13Q9Y226 551 aa11.16□□□□□ -0.62
CTSA-213ENST00000606782 LSM2Q9Y333 95 aaKnown RBP11.16□□□□□ -0.62
CTSA-213ENST00000606782 A0A1B0GTI1 187 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 LRRC30A6NM36 301 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 TBX1O43435 398 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 LALBAP00709 142 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 CD80P33681 288 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 KIR3DL2P43630 455 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 GTF2A1P52655 376 aaPredicted RBP11.15□□□□□ -0.62
CTSA-213ENST00000606782 WNT4P56705 351 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 FAM3AP98173 230 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 ALKBH1Q13686 389 aaKnown RBP11.15□□□□□ -0.62
CTSA-213ENST00000606782 DOC2BQ14184 412 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 ZNF404Q494X3 552 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 KCTD21Q4G0X4 260 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 WDR38Q5JTN6 314 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 RPL22L1Q6P5R6 122 aaKnown RBP11.15□□□□□ -0.62
CTSA-213ENST00000606782 Q6ZSR3 168 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 PGAP1Q75T13 922 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 MOGAT3Q86VF5 341 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 KLBQ86Z14 1044 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 SPARTQ8N0X7 666 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 PLPP7Q8NBV4 271 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 BHLHE23Q8NDY6 225 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 OR2AE1Q8NHA4 323 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 REEP6Q96HR9 211 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 NR1H4Q96RI1 486 aaPredicted RBP11.15□□□□□ -0.62
CTSA-213ENST00000606782 TMEM246Q9BRR3 403 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 MND1Q9BWT6 205 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.62
CTSA-213ENST00000606782 SLC22A4Q9H015 551 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 OPA3Q9H6K4 179 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 OR5V1Q9UGF6 321 aa11.15□□□□□ -0.62
CTSA-213ENST00000606782 SIRT4Q9Y6E7 314 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms