RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 OR2T6Q8NHC8 308 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 ANGPTL6Q8NI99 470 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 C8orf46Q8TAG6 207 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 PIFOQ8TCI5 191 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 NPRL2Q8WTW4 380 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 PIGCQ92535 297 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 R3HDM4Q96D70 268 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 PGAM5Q96HS1 289 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 LYZL4Q96KX0 146 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 CITED2Q99967 270 aaPredicted RBP7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 MICU1Q9BPX6 476 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 ABHD6Q9BV23 337 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 TSSK6Q9BXA6 273 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 TLNRD1Q9H1K6 362 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 YY1AP1Q9H869 796 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 ZNF702PQ9H963 129 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 TBC1D23Q9NUY8 699 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 VNN3Q9NY84 501 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 SAMD4AQ9UPU9 718 aaKnown RBP7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 MAB21L2Q9Y586 359 aa7.01□□□□□ -1.29
SHKBP1-220ENST00000599716 OR2AT4A6NND4 320 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 PSMD9O00233 223 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 ARPC2O15144 300 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 SIGLEC5O15389 551 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 IDH3BO43837 385 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 FABP3P05413 133 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 PSG2P11465 335 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 PIPP12273 146 aaPredicted RBP7□□□□□ -1.29
SHKBP1-220ENST00000599716 IGLL1P15814 213 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 DCTDP32321 178 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 DDOSTP39656 456 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 NAA10P41227 235 aaPredicted RBP7□□□□□ -1.29
SHKBP1-220ENST00000599716 GPM6AP51674 278 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 CAPZA1P52907 286 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 MZT1Q08AG7 82 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 CEP78Q5JTW2 689 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 LDLRAD2Q5SZI1 272 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 ATPAF1Q5TC12 328 aaPredicted RBP7□□□□□ -1.29
SHKBP1-220ENST00000599716 LINC01590Q5TEZ4 76 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 FOXB2Q5VYV0 432 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 HACD2Q6Y1H2 254 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 OR52L1Q8NGH7 329 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 OR4C15Q8NGM1 316 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 OR5P3Q8WZ94 311 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 RNF170Q96K19 258 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 RTL8AQ9BWD3 113 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 NMNAT2Q9BZQ4 307 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 METTL8Q9H825 291 aaKnown RBP7□□□□□ -1.29
SHKBP1-220ENST00000599716 SERTAD4Q9NUC0 356 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 NLKQ9UBE8 527 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 KLHDC2Q9Y2U9 406 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 LYVE1Q9Y5Y7 322 aa7□□□□□ -1.29
SHKBP1-220ENST00000599716 ANXA2P2A6NMY6 339 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 M0R1W7 72 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 TNFRSF11BO00300 401 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 SLC22A2O15244 555 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 SELENOFO60613 162 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 FBXO24O75426 580 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 ACAA1P09110 424 aaPredicted RBP6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 GLRA1P23415 457 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 OPRL1P41146 370 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 HCCSP53701 268 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 SMIM11AP58511 58 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 ACSM1Q08AH1 577 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 ZNF273Q14593 569 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 NCR3LG1Q68D85 454 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 CYP2R1Q6VVX0 501 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 TIGD4Q8IY51 512 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 C11orf42Q8N5U0 333 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 CD177Q8N6Q3 437 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 AQP11Q8NBQ7 271 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 RNF133Q8WVZ7 376 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 PPP1R14AQ96A00 147 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 C12orf43Q96C57 262 aaKnown RBP6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 TTTY10Q9BZA0 68 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 OR10A2Q9H208 303 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 OPA3Q9H6K4 179 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 GORASP2Q9H8Y8 452 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 VIPAS39Q9H9C1 493 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 SPAG4Q9NPE6 437 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 MRGBPQ9NV56 204 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 NECAP2Q9NVZ3 263 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 IL20Q9NYY1 176 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 ZNF222Q9UK12 451 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 SF3B6Q9Y3B4 125 aaKnown RBP6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 U3KQV3 271 aa6.99□□□□□ -1.29
SHKBP1-220ENST00000599716 FRAS1Q86XX4 4008 aa6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 ZNF732B4DXR9 585 aa6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 K7EIL1 84 aa6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 SYNGR1O43759 233 aa6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 GMNNO75496 209 aa6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 TIPRLO75663 272 aa6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 H2BFMP0C1H6 154 aa6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 H2AFXP16104 143 aaPredicted RBP6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 ATP6V1B2P21281 511 aa6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 IFNGR2P38484 337 aa6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 SLC15A1P46059 708 aa6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 CAV3P56539 151 aa6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 BLCAPP62952 87 aa6.98□□□□□ -1.29
SHKBP1-220ENST00000599716 GRB2P62993 217 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms