RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CLDN17P56750 224 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 ACTBP60709 375 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 ACTG1P63261 375 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 C9orf152Q5JTZ5 239 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 ASPHD2Q6ICH7 369 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 UNQ6126/PRO20091Q6UXV3 157 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 ANGPTL5Q86XS5 388 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 PLPP7Q8NBV4 271 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 NUDCD2Q8WVJ2 157 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 SLAMF6Q96DU3 332 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 NAA11Q9BSU3 229 aaPredicted RBP15.04■□□□□ -0
SHKBP1-205ENST00000594973 RNASEK-C17orf49H0YIS7 233 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 MFNGO00587 321 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 P04436 131 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 SFTA3P0C7M3 94 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 FKBP2P26885 142 aaKnown RBP15.04■□□□□ -0
SHKBP1-205ENST00000594973 PRSS3P35030 304 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 F2RL1P55085 397 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 DHRS2Q13268 280 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 HMGN3Q15651 99 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 ZNF227Q86WZ6 799 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 OR6X1Q8NH79 312 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 RNF133Q8WVZ7 376 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 CPNE4Q96A23 557 aaPredicted RBP15.04■□□□□ -0
SHKBP1-205ENST00000594973 RBM14Q96PK6 669 aaKnown RBP15.04■□□□□ -0
SHKBP1-205ENST00000594973 UCN2Q96RP3 112 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 TOLLIPQ9H0E2 274 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 G6PC2Q9NQR9 355 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 TAS2R4Q9NYW5 299 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 LPAR3Q9UBY5 353 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 STEAP1Q9UHE8 339 aa15.04■□□□□ -0
SHKBP1-205ENST00000594973 CBR3O75828 277 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 ITGA5P08648 1049 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 QDPRP09417 244 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 RNF224P0DH78 156 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 CSRP1P21291 193 aaKnown RBP15.03■□□□□ -0
SHKBP1-205ENST00000594973 TAS2R19P59542 299 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 RBM39Q14498 530 aaKnown RBP15.03■□□□□ -0
SHKBP1-205ENST00000594973 LRRC37A5PQ49AS3 106 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 GABRG1Q8N1C3 465 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 TMEM229BQ8NBD8 167 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 OR51D1Q8NGF3 324 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 OR13C3Q8NGS6 347 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 SGCZQ96LD1 299 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 DDA1Q9BW61 102 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 KCNK15Q9H427 330 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 PCDHGA1Q9Y5H4 931 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 POMT1Q9Y6A1 747 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 LOC107986453A0A1B0GWG9 222 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 P2RY10O00398 339 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 CD5P06127 495 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 CD2P06729 351 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 HGFACQ04756 655 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 ATXN7L3Q14CW9 347 aaPredicted RBP15.03■□□□□ -0
SHKBP1-205ENST00000594973 OR52W1Q6IF63 320 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 DHRS13Q6UX07 377 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 SSX9Q7RTT3 188 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 YRDCQ86U90 279 aaKnown RBP15.03■□□□□ -0
SHKBP1-205ENST00000594973 GALNT16Q8N428 558 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 PAQR4Q8N4S7 273 aaPredicted RBP15.03■□□□□ -0
SHKBP1-205ENST00000594973 CKLFQ9UBR5 152 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 NOP16Q9Y3C1 178 aaKnown RBP15.03■□□□□ -0
SHKBP1-205ENST00000594973 TIMM10BQ9Y5J6 103 aa15.03■□□□□ -0
SHKBP1-205ENST00000594973 MRPS18BQ9Y676 258 aaKnown RBP15.03■□□□□ -0
SHKBP1-205ENST00000594973 TNFSF11O14788 317 aa15.02■□□□□ -0
SHKBP1-205ENST00000594973 LMX1BO60663 402 aa15.02■□□□□ -0
SHKBP1-205ENST00000594973 CTAG2O75638 210 aa15.02■□□□□ -0
SHKBP1-205ENST00000594973 CPT2P23786 658 aa15.02■□□□□ -0
SHKBP1-205ENST00000594973 GLP1RP43220 463 aa15.02■□□□□ -0
SHKBP1-205ENST00000594973 OR10S1Q8NGN2 331 aa15.02■□□□□ -0
SHKBP1-205ENST00000594973 OR1J2Q8NGS2 313 aa15.02■□□□□ -0
SHKBP1-205ENST00000594973 GDF2Q9UK05 429 aaPredicted RBP15.02■□□□□ -0
SHKBP1-205ENST00000594973 HHLA2Q9UM44 414 aa15.02■□□□□ -0
SHKBP1-205ENST00000594973 LHFPL6Q9Y693 200 aa15.02■□□□□ -0
SHKBP1-205ENST00000594973 NQO2P16083 231 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 CFPP27918 469 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 H3F3AP84243 136 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 CHAF1BQ13112 559 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 ATPAF1Q5TC12 328 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 TMED4Q7Z7H5 227 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 OR10R2Q8NGX6 335 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 GPX8Q8TED1 209 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 THRSPQ92748 146 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 FBXO17Q96EF6 278 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 LIN37Q96GY3 246 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 SMIM8Q96KF7 97 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 PIGQQ9BRB3 760 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 SPRY4Q9C004 299 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 PPP1R14DQ9NXH3 145 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 FAM96BQ9Y3D0 163 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 KPTNQ9Y664 436 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 TRBV6-7A0A0A0MS04 114 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 RAB3DO95716 219 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 MT-CO3P00414 261 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 SERPINA7P05543 415 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 RFPL3SP0C7P2 107 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 EFNB2P52799 333 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 GUCA2AQ02747 115 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 TMEM164Q5U3C3 297 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 SLC25A47Q6Q0C1 308 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms