RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 HERPUD1Q15011 391 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 BEAN1Q3B7T3 259 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 KPRPQ5T749 579 aaPredicted RBP12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 OR2T5Q6IEZ7 315 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 C16orf89Q6UX73 402 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 FTMTQ8N4E7 242 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 IQCF1Q8N6M8 205 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 OR2T29Q8NH02 315 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 OTOSQ8NHW6 89 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 CFHR4Q92496 578 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 DUS3LQ96G46 650 aaKnown RBP12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 RNF170Q96K19 258 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 NIPSNAP1Q9BPW8 284 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 MAGIXQ9H6Y5 334 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 NLKQ9UBE8 527 aa12.96□□□□□ -0.33
GTF2F1-203ENST00000594213 ANKRD61A6NGH8 418 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 NKX6-3A6NJ46 265 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 OR2AT4A6NND4 320 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 RHBDL1O75783 438 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 PSG2P11465 335 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 AANATQ16613 207 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 FBLN7Q53RD9 439 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 ZNF454Q8N9F8 522 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 PIGCQ92535 297 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 FAM107BQ9H098 131 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 OR51I2Q9H344 312 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 KLHDC2Q9Y2U9 406 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 SF3B6Q9Y3B4 125 aaKnown RBP12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 SAMHD1Q9Y3Z3 626 aaKnown RBP12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 U3KQV3 271 aa12.95□□□□□ -0.34
GTF2F1-203ENST00000594213 G3V4G9 280 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 H3BUX3 64 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 OPN1MWP04001 364 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 LYNP07948 512 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 OPN1MW2P0DN77 364 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 OPN1MW3P0DN78 364 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 NDUFB7P17568 137 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 SAMD5Q5TGI4 173 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 LCN8Q6JVE9 175 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 ZDHHC23Q8IYP9 409 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 C11orf42Q8N5U0 333 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 ZNRF1Q8ND25 227 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 OR8B12Q8NGG6 310 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 OR5D13Q8NGL4 314 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 PIFOQ8TCI5 191 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 SDSLQ96GA7 329 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 SSX3Q99909 188 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 OR51V1Q9H2C8 321 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 REEP1Q9H902 201 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 ELL3Q9HB65 397 aaPredicted RBP12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 NDE1Q9NXR1 346 aa12.94□□□□□ -0.34
GTF2F1-203ENST00000594213 TRBV23-1A0A0A0MS06 115 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 A0A1W2PQ09 198 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 SELENOFO60613 162 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 GLRA1P23415 457 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 GPM6AP51674 278 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 PSMA6P60900 246 aaKnown RBP12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 MS4A2Q01362 244 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 BLMHQ13867 455 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 HIST2H2BDQ6DRA6 164 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 C11orf88Q6PI97 169 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 Q6ZTK2 550 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 OR10G2Q8NGC3 310 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 THEM6Q8WUY1 208 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 RORBQ92753 470 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 FEVQ99581 238 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 FOXJ3Q9UPW0 622 aa12.93□□□□□ -0.34
GTF2F1-203ENST00000594213 MTRF1O75570 445 aaKnown RBP12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 ALOX5APP20292 161 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 POU1F1P28069 291 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 GABRA2P47869 451 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 GNG3P63215 75 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 GK3PQ14409 553 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 CEACAM21Q3KPI0 293 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 KCTD8Q6ZWB6 473 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 PIGWQ7Z7B1 504 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 OR5K1Q8NHB7 308 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 TEX47Q8TBZ9 253 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 AQP3Q92482 292 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 ITFG2Q969R8 447 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 OTULINQ96BN8 352 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 FAM234AQ9H0X4 552 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 RANBP3Q9H6Z4 567 aaPredicted RBP12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 NIPAL2Q9H841 368 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 C19orf12Q9NSK7 152 aa12.92□□□□□ -0.34
GTF2F1-203ENST00000594213 A0A0U1RQV5 110 aa12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 ARRDC5A6NEK1 342 aa12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 ACOD1A6NK06 481 aa12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 ZNF732B4DXR9 585 aa12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 IGLV3-1P01715 115 aa12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 PAX6P26367 422 aa12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 TRIM25Q14258 630 aaKnown RBP12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 LY6EQ16553 131 aa12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 LRRC75BQ2VPJ9 315 aa12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 PLBD1Q6P4A8 553 aa12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 TRPM8Q7Z2W7 1104 aa12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 CPLX4Q7Z7G2 160 aa12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 MKXQ8IYA7 352 aa12.91□□□□□ -0.34
GTF2F1-203ENST00000594213 CD177Q8N6Q3 437 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms