RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 MAGOHP61326 146 aaKnown RBP6.99□□□□□ -1.29
SMAD4-215ENST00000592911 RPL31P62899 125 aaKnown RBP6.99□□□□□ -1.29
SMAD4-215ENST00000592911 HOXA4Q00056 320 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-215ENST00000592911 IL18R1Q13478 541 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 TIGD6Q17RP2 521 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 AGBL2Q5U5Z8 902 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 ZNF770Q6IQ21 691 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-215ENST00000592911 RPL13AP3Q6NVV1 102 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 CCBE1Q6UXH8 406 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-215ENST00000592911 Q6ZS46 218 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 CBLL1Q75N03 491 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 SLC16A9Q7RTY1 509 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 WDR86Q86TI4 376 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 NAA40Q86UY6 237 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 LINC00346Q8IVM7 164 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 FGFRL1Q8N441 504 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 ZNF561Q8N587 486 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 LINC00482Q8N8I6 264 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 SDR9C7Q8NEX9 313 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 OR11H6Q8NGC7 330 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 OR2T4Q8NH00 348 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 RORBQ92753 470 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 FAM46AQ96IP4 442 aaKnown RBP6.99□□□□□ -1.29
SMAD4-215ENST00000592911 DHRS1Q96LJ7 313 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 TSSK2Q96PF2 358 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 ERMAPQ96PL5 475 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-215ENST00000592911 COPS4Q9BT78 406 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 SSBP4Q9BWG4 385 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-215ENST00000592911 MUC13Q9H3R2 512 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 INPP5EQ9NRR6 644 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 MRPL22Q9NWU5 206 aaKnown RBP6.99□□□□□ -1.29
SMAD4-215ENST00000592911 RHCGQ9UBD6 479 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 ZNF222Q9UK12 451 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 ENPP4Q9Y6X5 453 aa6.99□□□□□ -1.29
SMAD4-215ENST00000592911 RYR2Q92736 4967 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 FAM90A22PA8MWA6 464 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 M0QZK8 103 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 IGHA1P01876 353 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 CALRP27797 417 aaKnown RBP6.98□□□□□ -1.29
SMAD4-215ENST00000592911 CHATP28329 748 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 DCTDP32321 178 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 IFNGR2P38484 337 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 ARHGDIBP52566 201 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 CSNK2BP67870 215 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 DGCR2P98153 550 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 TAF13Q15543 124 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 CASC10Q5T4H9 136 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 ZNF626Q68DY1 528 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 TBPL2Q6SJ96 375 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 ZBTB49Q6ZSB9 765 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 CENPVQ7Z7K6 275 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-215ENST00000592911 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-215ENST00000592911 MKXQ8IYA7 352 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 C11orf42Q8N5U0 333 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 FAM86B1Q8N7N1 296 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 Q8NFD4 153 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 ZNF671Q8TAW3 534 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 MUC7Q8TAX7 377 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 REEP6Q96HR9 211 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 NMNAT3Q96T66 252 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 MYCBPQ99417 103 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-215ENST00000592911 PAPOLGQ9BWT3 736 aaKnown RBP6.98□□□□□ -1.29
SMAD4-215ENST00000592911 OR10A2Q9H208 303 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 VIPAS39Q9H9C1 493 aa6.98□□□□□ -1.29
SMAD4-215ENST00000592911 RPRD1BQ9NQG5 326 aaKnown RBP6.98□□□□□ -1.29
SMAD4-215ENST00000592911 FAM32AQ9Y421 112 aaKnown RBP6.98□□□□□ -1.29
SMAD4-215ENST00000592911 OR5B21A6NL26 309 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 C17orf98A8MV24 154 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 J3KTA2 159 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 SLC1A7O00341 560 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 MTRF1O75570 445 aaKnown RBP6.97□□□□□ -1.29
SMAD4-215ENST00000592911 PGA5P0DJD9 388 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 PSG2P11465 335 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 SELLP14151 372 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 HIST1H1CP16403 213 aaKnown RBP6.97□□□□□ -1.29
SMAD4-215ENST00000592911 GLRA1P23415 457 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 ENTPD1P49961 510 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 OR12D2P58182 307 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 HABP2Q14520 560 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-215ENST00000592911 SMIM21Q3B7S5 101 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 LCN8Q6JVE9 175 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 DCXRQ7Z4W1 244 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 THAP5Q7Z6K1 395 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 VTCN1Q7Z7D3 282 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 FAM185AQ8N0U4 392 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 COMMD1Q8N668 190 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 TMEM185AQ8NFB2 350 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 FANK1Q8TC84 345 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 OR5P3Q8WZ94 311 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 MYDGFQ969H8 173 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 SLAMF6Q96DU3 332 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 CHID1Q9BWS9 393 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 TMEM120AQ9BXJ8 343 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 ZFP57Q9NU63 452 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 LSM4Q9Y4Z0 139 aaKnown RBP6.97□□□□□ -1.29
SMAD4-215ENST00000592911 SNX13Q9Y5W8 968 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 COMMD3-BMI1R4GMX3 469 aa6.97□□□□□ -1.29
SMAD4-215ENST00000592911 EPPK1P58107 5090 aaKnown RBP6.96□□□□□ -1.29
SMAD4-215ENST00000592911 IGKV1D-17A0A075B6S4 117 aa6.96□□□□□ -1.3
SMAD4-215ENST00000592911 LCE6AA0A183 80 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms