RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 BOD1Q96IK1 185 aa9.04□□□□□ -0.96
VPS25-203ENST00000589520 RNF170Q96K19 258 aa9.04□□□□□ -0.96
VPS25-203ENST00000589520 DMRTB1Q96MA1 342 aa9.04□□□□□ -0.96
VPS25-203ENST00000589520 FYTTD1Q96QD9 318 aaKnown RBP9.04□□□□□ -0.96
VPS25-203ENST00000589520 KCNK15Q9H427 330 aa9.04□□□□□ -0.96
VPS25-203ENST00000589520 SLA2Q9H6Q3 261 aa9.04□□□□□ -0.96
VPS25-203ENST00000589520 IL36GQ9NZH8 169 aa9.04□□□□□ -0.96
VPS25-203ENST00000589520 SPRR3Q9UBC9 169 aa9.04□□□□□ -0.96
VPS25-203ENST00000589520 AHCTF1Q8WYP5 2266 aa9.04□□□□□ -0.96
VPS25-203ENST00000589520 DSPP15924 2871 aaKnown RBP9.04□□□□□ -0.96
VPS25-203ENST00000589520 LAMA1P25391 3075 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 KIAA1549Q9HCM3 1950 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 IGF2RP11717 2491 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 TMEM235A6NFC5 223 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 CST4P01036 141 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 CSTBP04080 98 aaKnown RBP9.03□□□□□ -0.96
VPS25-203ENST00000589520 AMY2AP04746 511 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 C4BPBP20851 252 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 APLNRP35414 380 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 PMELP40967 661 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 RAB1AP62820 205 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 MRPL49Q13405 166 aaKnown RBP9.03□□□□□ -0.96
VPS25-203ENST00000589520 DEFB109BQ30KR1 87 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 SLC22A6Q4U2R8 563 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 TMEM255AQ5JRV8 349 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 RNFT1Q5M7Z0 435 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 VAX1Q5SQQ9 334 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 PLXDC2Q6UX71 529 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 IDO2Q6ZQW0 420 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 NUFIP2Q7Z417 695 aaKnown RBP9.03□□□□□ -0.96
VPS25-203ENST00000589520 ZDHHC22Q8N966 263 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 CPEB3Q8NE35 698 aaKnown RBP9.03□□□□□ -0.96
VPS25-203ENST00000589520 OR51S1Q8NGJ8 323 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 OR1K1Q8NGR3 316 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 OR8S1Q8NH09 359 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 FGFBP3Q8TAT2 258 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 CAPSLQ8WWF8 208 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 BCL2L2Q92843 193 aaPredicted RBP9.03□□□□□ -0.96
VPS25-203ENST00000589520 WNT2BQ93097 391 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 GAL3ST1Q99999 423 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 REPIN1Q9BWE0 567 aaKnown RBP9.03□□□□□ -0.96
VPS25-203ENST00000589520 PLSCR2Q9NRY7 297 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 MYEF2Q9P2K5 600 aaKnown RBP9.03□□□□□ -0.96
VPS25-203ENST00000589520 CLCF1Q9UBD9 225 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 EIF3KQ9UBQ5 218 aaKnown RBP9.03□□□□□ -0.96
VPS25-203ENST00000589520 ZNF222Q9UK12 451 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 HSF4Q9ULV5 492 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 LIPGQ9Y5X9 500 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 KCNMB2Q9Y691 235 aa9.03□□□□□ -0.96
VPS25-203ENST00000589520 ITPR1Q14643 2758 aa9.02□□□□□ -0.96
VPS25-203ENST00000589520 A8MV72 311 aaPredicted RBP9.02□□□□□ -0.97
VPS25-203ENST00000589520 PYCARD-AS1I3L0S3 204 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 MFNGO00587 321 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 RLN1P04808 185 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 IFNA6P05013 189 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 GIPP09681 153 aaPredicted RBP9.02□□□□□ -0.97
VPS25-203ENST00000589520 PATE4P0C8F1 98 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 ZNF735P0CB33 412 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 GSTT2P0CG29 244 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 TMEM225BP0DP42 221 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 CD79AP11912 226 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 MGMTP16455 207 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 GNB3P16520 340 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 TUBG1P23258 451 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 ACKR3P25106 362 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 ECI1P42126 302 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 TMEM50BP56557 158 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 ZP1P60852 638 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 ZNF169Q14929 603 aaPredicted RBP9.02□□□□□ -0.97
VPS25-203ENST00000589520 RSU1Q15404 277 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 MPPED2Q15777 294 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 EIF2S3LQ2VIR3 472 aaKnown RBP9.02□□□□□ -0.97
VPS25-203ENST00000589520 SFRP5Q5T4F7 317 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 RPUSD3Q6P087 351 aaKnown RBP9.02□□□□□ -0.97
VPS25-203ENST00000589520 SLC36A1Q7Z2H8 476 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 TMEM17Q86X19 198 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 SAXO1Q8IYX7 474 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 ARRDC1Q8N5I2 433 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 OR11H7Q8NGC8 314 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 SNAPC3Q92966 411 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 POM121L2Q96KW2 1035 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 ZNF436Q9C0F3 470 aaPredicted RBP9.02□□□□□ -0.97
VPS25-203ENST00000589520 TUBG2Q9NRH3 451 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 GPR173Q9NS66 373 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 B3GNT2Q9NY97 397 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 KLK13Q9UKR3 277 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 EDARQ9UNE0 448 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 FLVCR2Q9UPI3 526 aa9.02□□□□□ -0.97
VPS25-203ENST00000589520 NOP16Q9Y3C1 178 aaKnown RBP9.02□□□□□ -0.97
VPS25-203ENST00000589520 LOC400499M0QZD8 3231 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 A0A096LPE4 126 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 A0A1W2PPZ6 126 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 TMEM82A0PJX8 343 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 C5orf63A6NC05 138 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 MEIS3P1A6NDR6 274 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A10PA6NDY2 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A18PA6NE21 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A16PA6NEW6 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A20PA6NIJ5 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A8PA6NJQ4 464 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms