RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	MSRB3	Q8IXL7	192 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	CLIP4	Q8N3C7	705 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	C17orf78	Q8N4C9	275 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	TMEM104	Q8NE00	496 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	OR2T12	Q8NG77	320 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	OR10A6	Q8NH74	314 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	HSD17B8	Q92506	261 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	PIGT	Q969N2	578 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	MRGPRF	Q96AM1	343 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	S100PBP	Q96BU1	408 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	LRRC58	Q96CX6	371 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	WFIKKN1	Q96NZ8	548 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	TECTB	Q96PL2	329 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	ZNF300	Q96RE9	604 aa	Predicted RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	CCT8L2	Q96SF2	557 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	CCL19	Q99731	98 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	C20orf24	Q9BUV8	137 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	LRMDA	Q9H2I8	198 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	IKZF5	Q9H5V7	419 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	ZNF385D	Q9H6B1	395 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	KAT8	Q9H7Z6	458 aa	Known RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	DCLRE1B	Q9H816	532 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	NANOG	Q9H9S0	305 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	EFCAB1	Q9HAE3	211 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	SAP30L	Q9HAJ7	183 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	CDH20	Q9HBT6	801 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	SAR1A	Q9NR31	198 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	INIP	Q9NRY2	104 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	GAR1	Q9NY12	217 aa	Known RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	TAS2R16	Q9NYV7	291 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	ENPP5	Q9UJA9	477 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	POU2F3	Q9UKI9	436 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	RNF150	Q9ULK6	438 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	FLVCR2	Q9UPI3	526 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	RASD1	Q9Y272	281 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	EXOG	Q9Y2C4	368 aa	Known RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	CACNG2	Q9Y698	323 aa		4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	SPTBN1	Q01082	2364 aa	Known RBP	4.03	□□□□□ -1.76
ZNF540-204	ENST00000586792	SETX	Q7Z333	2677 aa	Known RBP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	PRRC2C	Q9Y520	2896 aa	Known RBP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	TRAV36DV7	A0A075B6V5	113 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	NBPF19	A0A087WUL8	3843 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	TRBV5-3	A0A0A0MS03	114 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792		A0A0A6YYH2	397 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792		A0A1B0GWA3	101 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	LOC390937	A0A1W2PQ73	354 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792		A6NJ64	397 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	CPSF4L	A6NMK7	179 aa	Known RBP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	FAM220BP	B1ANY3	271 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	ZNF587B	E7ETH6	402 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	DENR	O43583	198 aa	Known RBP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	CHP2	O43745	196 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	SSX4	O60224	188 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	DCTN3	O75935	186 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	FCER2	P06734	321 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	CRYGB	P07316	175 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	ERCC1	P07992	297 aa	Predicted RBP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	NQO2	P16083	231 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	ACKR3	P25106	362 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	KCNJ3	P48549	501 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	SLC9A3	P48764	834 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	SLC7A2	P52569	658 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	KRTAP10-12	P60413	245 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	UBE2N	P61088	152 aa	Known RBP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	GNGT1	P63211	74 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	HOXC5	Q00444	222 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	BDH1	Q02338	343 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	PMS2P3	Q13401	168 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	VEZF1	Q14119	521 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	P2RY14	Q15391	338 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	OR1Q1	Q15612	314 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	TAB1	Q15750	504 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	DEFB113	Q30KQ7	82 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	ALKBH6	Q3KRA9	238 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	TIMM23B	Q5SRD1	257 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	ZNF613	Q6PF04	617 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	TTC33	Q6PID6	262 aa	Predicted RBP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	DCDC5	Q6ZRR9	648 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	LHFPL3	Q86UP9	236 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	IGFN1	Q86VF2	1251 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	CYP4Z1	Q86W10	505 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	UEVLD	Q8IX04	471 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	GABRG1	Q8N1C3	465 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	TMEM99	Q8N816	258 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	SYT14	Q8NB59	555 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	PAPD5	Q8NDF8	572 aa	Known RBP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	PROKR2	Q8NFJ6	384 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	MFSD8	Q8NHS3	518 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	C10orf82	Q8WW14	230 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	SPRYD4	Q8WW59	207 aa	Predicted RBP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	DNAJC9	Q8WXX5	260 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	NRGN	Q92686	78 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	HIST1H2AC	Q93077	130 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	BORCS5	Q969J3	196 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	RCN3	Q96D15	328 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	CMTM5	Q96DZ9	223 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	PLEKHA8	Q96JA3	519 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	MCHR1	Q99705	422 aa		4.02	□□□□□ -1.77

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