RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ANXA2P07355 339 aaKnown RBP12.23□□□□□ -0.45
COMMD4-225ENST00000569245 MSMBP08118 114 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 GADD45AP24522 165 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 SRP14P37108 136 aaKnown RBP12.23□□□□□ -0.45
COMMD4-225ENST00000569245 DVL1P1P54792 670 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-225ENST00000569245 PRSS12P56730 875 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 LMO4P61968 165 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 RPS11P62280 158 aaKnown RBP eCLIP12.23□□□□□ -0.45
COMMD4-225ENST00000569245 RPS25P62851 125 aaKnown RBP12.23□□□□□ -0.45
COMMD4-225ENST00000569245 BCL2L15Q5TBC7 163 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 COLCA1Q6ZS62 124 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 SLC16A12Q6ZSM3 486 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 PGAP1Q75T13 922 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 MRPL21Q7Z2W9 205 aaKnown RBP12.23□□□□□ -0.45
COMMD4-225ENST00000569245 OR10AD1Q8NGE0 317 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 OR52H1Q8NGJ2 320 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 OR51F2Q8NH61 342 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 RAB2BQ8WUD1 216 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 ITLN1Q8WWA0 313 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 PPP1R14AQ96A00 147 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 RAB39BQ96DA2 213 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 OR2V2Q96R30 315 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 PDCD1LG2Q9BQ51 273 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 COMMD4Q9H0A8 199 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 TMEM100Q9NV29 134 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 HIF1ANQ9NWT6 349 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 IL19Q9UHD0 177 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 PPP1R3CQ9UQK1 317 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 SLC22A13Q9Y226 551 aa12.23□□□□□ -0.45
COMMD4-225ENST00000569245 CHD3Q12873 2000 aaKnown RBP12.22□□□□□ -0.45
COMMD4-225ENST00000569245 AIREO43918 545 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 GPX5O75715 221 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 SC5DO75845 299 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 SERPINA3P01011 423 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 UBCP0CG48 685 aaKnown RBP12.22□□□□□ -0.45
COMMD4-225ENST00000569245 SLC2A1P11166 492 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 FGF9P31371 208 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-225ENST00000569245 GK2Q14410 553 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-225ENST00000569245 TMEM244Q5VVB8 128 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 FOXB2Q5VYV0 432 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 FAM57BQ71RH2 274 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 ZNF676Q8N7Q3 588 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 OR8B12Q8NGG6 310 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 TMEM203Q969S6 136 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 TMEM186Q96B77 213 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 DGCR14Q96DF8 476 aaKnown RBP12.22□□□□□ -0.45
COMMD4-225ENST00000569245 PGAM5Q96HS1 289 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 TMED9Q9BVK6 235 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 NAA50Q9GZZ1 169 aaKnown RBP12.22□□□□□ -0.45
COMMD4-225ENST00000569245 OR51E2Q9H255 320 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 BRD7Q9NPI1 651 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 TMEM106BQ9NUM4 274 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 PCDHB10Q9UN67 800 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 GTF2A1LQ9UNN4 478 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 SVEP1Q4LDE5 3571 aa12.22□□□□□ -0.45
COMMD4-225ENST00000569245 IGHV3-64DA0A0J9YX35 117 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 TRBV5-5A0A0J9YX44 114 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 A0A0U1RQV5 110 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 IQCF6A8MYZ5 107 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 RGS9O75916 674 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-225ENST00000569245 IGLV3-1P01715 115 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 SRP9P49458 86 aaKnown RBP12.21□□□□□ -0.45
COMMD4-225ENST00000569245 FABP5Q01469 135 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 HNRNPA0Q13151 305 aaKnown RBP12.21□□□□□ -0.45
COMMD4-225ENST00000569245 CTF1Q16619 201 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 SNAI3Q3KNW1 292 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 FAHD2BQ6P2I3 314 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-225ENST00000569245 TMEM91Q6ZNR0 172 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 RGP1Q92546 391 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-225ENST00000569245 PHYHIPQ92561 330 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 ISOC1Q96CN7 298 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 FAHD2AQ96GK7 314 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 SLC30A2Q9BRI3 323 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 OR10A2Q9H208 303 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 DCAF16Q9NXF7 216 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 ZNF319Q9P2F9 582 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 RSL24D1Q9UHA3 163 aaKnown RBP12.21□□□□□ -0.45
COMMD4-225ENST00000569245 SSR3Q9UNL2 185 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 NPTNQ9Y639 398 aa12.21□□□□□ -0.45
COMMD4-225ENST00000569245 ATRQ13535 2644 aa12.21□□□□□ -0.46
COMMD4-225ENST00000569245 YLPM1P49750 1951 aaKnown RBP12.2□□□□□ -0.46
COMMD4-225ENST00000569245 TRAV20A0A0B4J274 112 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 A0A1B0GTI1 187 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 GGT3PA6NGU5 568 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 F5H5P2 479 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 H0YL77 283 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 GABRPO00591 440 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 NOL3O60936 208 aaKnown RBP12.2□□□□□ -0.46
COMMD4-225ENST00000569245 GATBO75879 557 aaKnown RBP12.2□□□□□ -0.46
COMMD4-225ENST00000569245 IGHV2-5P01817 119 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 CCL1P22362 96 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 ANOS1P23352 680 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 RBMXP38159 391 aaKnown RBP12.2□□□□□ -0.46
COMMD4-225ENST00000569245 Q499Y3 187 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 ACSM3Q53FZ2 586 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 UNQ9370/PRO34162Q6UXP9 181 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 Q6ZSR3 168 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 RDH10Q8IZV5 341 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 CCDC54Q8NEL0 328 aa12.2□□□□□ -0.46
COMMD4-225ENST00000569245 OR2AE1Q8NHA4 323 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms