RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SURF2Q15527 256 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 LYSMD4Q5XG99 296 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 TMEM225Q6GV28 225 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 GUSBP11Q6P575 273 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 CLEC9AQ6UXN8 241 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 TMPPEQ6ZT21 453 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 ANKRD37Q7Z713 158 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 HIST3H2BBQ8N257 126 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 POC1AQ8NBT0 407 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 SLC38A9Q8NBW4 561 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 LFNGQ8NES3 379 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 OR4S1Q8NGB4 309 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 M1APQ8TC57 530 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 MUCL1Q96DR8 90 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 DNAJA3Q96EY1 480 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 SCGB3A2Q96PL1 93 aa12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 NUDT16L1Q9BRJ7 211 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 MRPL37Q9BZE1 423 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-220ENST00000560998 A0A087WWC5 75 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 LY6G6EA0A0G2JKS1 128 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 OR5H15A6NDH6 313 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 TMEM235A6NFC5 223 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 OR5H1A6NKK0 313 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 CEACAM18A8MTB9 384 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 TGOLN2O43493 480 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 TIAF1O95411 115 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 ALOX5APP20292 161 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 DHPSP49366 369 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 EIF2B1Q14232 305 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 HNF4GQ14541 408 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 SGCBQ16585 318 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 ZNF260Q3ZCT1 412 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 NKAIN1Q4KMZ8 207 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 MIDNQ504T8 468 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 WDR38Q5JTN6 314 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 C16orf47Q6ZP98 133 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 GRINAQ7Z429 371 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 NFAM1Q8NET5 270 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 SLC25A36Q96CQ1 311 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 SLC26A1Q9H2B4 701 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 UNKLQ9H9P5 680 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 LUZP4Q9P127 313 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 PISDQ9UG56 409 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 DHDHQ9UQ10 334 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 STRAPQ9Y3F4 350 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 U3KQA8 63 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 LOC100509620A0A075B734 347 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 A8MVM7 634 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 C11orf98E9PRG8 122 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 H7C1Q1 480 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 FBXO45P0C2W1 286 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 IGFBP3P17936 291 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 NKX6-1P78426 367 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 CCL7P80098 99 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 NHLH2Q02577 135 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 IL15RAQ13261 267 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 C1orf100Q5SVJ3 147 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 GLYATL3Q5SZD4 288 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 OR2A2Q6IF42 318 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 ZNF529Q6P280 563 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 LRRC18Q8N456 261 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 APCDD1LQ8NCL9 501 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 MISP3Q96FF7 219 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 OR6C1Q96RD1 312 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 C20orf24Q9BUV8 137 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 DUSP23Q9BVJ7 150 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 METTL9Q9H1A3 318 aa12.34□□□□□ -0.43
RABGGTA-220ENST00000560998 USP34Q70CQ2 3546 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 CPAMD8Q8IZJ3 1885 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 A0A1B0GTH9 108 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 A0A1W2PQM1 296 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 ZNF726A6NNF4 738 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 ZNF724A8MTY0 619 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 DXOO77932 396 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 HEXBP07686 556 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 SEC11BP0C7V7 166 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 C1orf140Q5VVS0 124 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 PPP1R3BQ86XI6 285 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 TGIF2LXQ8IUE1 241 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 NKAIN3Q8N8D7 197 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 PLPP7Q8NBV4 271 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 OR6N2Q8NGY6 317 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 ZNF519Q8TB69 540 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 MR1Q95460 341 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 INTS14Q96SY0 518 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 SOX7Q9BT81 388 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 CNTNAP3Q9BZ76 1288 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 ULBP3Q9BZM4 244 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 EIF5A2Q9GZV4 153 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 ARV1Q9H2C2 271 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 RAB22AQ9UL26 194 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 ZDHHC8Q9ULC8 765 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 TNRC6BQ9UPQ9 1833 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 PI4KAP42356 2102 aa12.33□□□□□ -0.44
RABGGTA-220ENST00000560998 XKRYO14609 159 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 ZNF354AO60765 605 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 DANCRP0C864 163 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 COX5BP10606 129 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 CRABP1P29762 137 aa12.32□□□□□ -0.44
RABGGTA-220ENST00000560998 HRH1P35367 487 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 207.6 ms