RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 TP53I3Q53FA7 332 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 BCL2L15Q5TBC7 163 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 LIPNQ5VXI9 398 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 RPL22L1Q6P5R6 122 aaKnown RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 SLC22A25Q6T423 547 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 FBXW12Q6X9E4 464 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF704Q6ZNC4 412 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 SSX6Q7RTT6 188 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 LHFPL3Q86UP9 236 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 MYPOPQ86VE0 399 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF101Q8IZC7 436 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 PAQR4Q8N4S7 273 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF283Q8N7M2 679 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 TSPAN14Q8NG11 270 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 AKAP1Q92667 903 aaKnown RBP eCLIP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 RORBQ92753 470 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 PELI1Q96FA3 418 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 C4orf36Q96KX1 117 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 TBX5Q99593 518 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 VCX3AQ9NNX9 186 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 TRIM36Q9NQ86 728 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 ACOXLQ9NUZ1 547 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 NUFIP1Q9UHK0 495 aaKnown RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 GNG8Q9UK08 70 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 LSM2Q9Y333 95 aaKnown RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 GRIP1Q9Y3R0 1128 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 HCFC1P51610 2035 aa4.9□□□□□ -1.62
SCAF11-213ENST00000550629 FASNP49327 2511 aaKnown RBP4.9□□□□□ -1.62
SCAF11-213ENST00000550629 PCNX1Q96RV3 2341 aa4.9□□□□□ -1.62
SCAF11-213ENST00000550629 SPTBN1Q01082 2364 aaKnown RBP4.9□□□□□ -1.62
SCAF11-213ENST00000550629 UNC79Q9P2D8 2635 aa4.9□□□□□ -1.62
SCAF11-213ENST00000550629 TMEM212A6NML5 194 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 DHRS7CA6NNS2 312 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 SHISA9B4DS77 424 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 J3QLW9 94 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 RAB27BO00194 218 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 OGG1O15527 345 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 GPRIN2O60269 458 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 MT-ND2P03891 347 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 LCATP04180 440 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 ANXA2P07355 339 aaKnown RBP4.9□□□□□ -1.63
SCAF11-213ENST00000550629 ADRA2AP08913 450 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 CCL2P13500 99 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 ATP6V1B1P15313 513 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 ZNF250P15622 560 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 SELEP16581 610 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 ZNF12P17014 697 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 ZNF19P17023 458 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 CCL1P22362 96 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 CCNOP22674 350 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 CALCRP30988 508 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 DDOSTP39656 456 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 PRKXP51817 358 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 ZNF121P58317 390 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-213ENST00000550629 SELENOVP59797 346 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 PPP1CBP62140 327 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 TLE4Q04727 773 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 SNTB2Q13425 540 aaKnown RBP4.9□□□□□ -1.63
SCAF11-213ENST00000550629 SNTB1Q13884 538 aaKnown RBP4.9□□□□□ -1.63
SCAF11-213ENST00000550629 EFNB3Q15768 340 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 MOGQ16653 247 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 GFOD2Q3B7J2 385 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 ZNF672Q499Z4 452 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-213ENST00000550629 UBE2UQ5VVX9 321 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 MORN5Q5VZ52 161 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 C11orf87Q6NUJ2 197 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 Q6ZSR3 168 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 RFPL4BQ6ZWI9 263 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 KRT74Q7RTS7 529 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 ZNF367Q7RTV3 350 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 CATSPERDQ86XM0 798 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 ELMOD2Q8IZ81 293 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 FTMTQ8N4E7 242 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 OR2G2Q8NGZ5 317 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 RPS4Y2Q8TD47 263 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 SPRYD4Q8WW59 207 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-213ENST00000550629 SLC7A6Q92536 515 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 SGCDQ92629 289 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 THRSPQ92748 146 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 RPL36ALQ969Q0 106 aaKnown RBP4.9□□□□□ -1.63
SCAF11-213ENST00000550629 PIK3IP1Q96FE7 263 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 PGAM5Q96HS1 289 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 DHRS9Q9BPW9 319 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 CCDC90BQ9GZT6 254 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 PBOV1Q9GZY1 135 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 ISG20L2Q9H9L3 353 aaKnown RBP4.9□□□□□ -1.63
SCAF11-213ENST00000550629 ACOT13Q9NPJ3 140 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 G6PC2Q9NQR9 355 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 CA10Q9NS85 328 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 FAIMQ9NVQ4 179 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 CLEC2DQ9UHP7 191 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 POU2F3Q9UKI9 436 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 OR52A1Q9UKL2 312 aa4.9□□□□□ -1.63
SCAF11-213ENST00000550629 CACNA1CQ13936 2221 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 HRNRQ86YZ3 2850 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-213ENST00000550629 TACC2O95359 2948 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 DCHS2Q6V1P9 2916 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 IGLV3-9A0A075B6K5 115 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 TRBV2A0A0J9YWF9 115 aa4.89□□□□□ -1.63
SCAF11-213ENST00000550629 A0A1B0GWJ7 208 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms