RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 ADAM11O75078 769 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 IGHA2P01877 340 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 SPINK2P20155 84 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 CSRP3P50461 194 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 FABP5Q01469 135 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 BEX5Q5H9J7 111 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 PRSS54Q6PEW0 395 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 FAM219AQ8IW50 185 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 EIF4E3Q8N5X7 224 aaKnown RBP7.01□□□□□ -1.29
VPS13D-211ENST00000543710 TCTEX1D1Q8N7M0 179 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 TMEM56Q96MV1 263 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 B9D1Q9UPM9 204 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 TMEM218A2RU14 115 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 MEIS3P1A6NDR6 274 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 OTOL1A6NHN0 477 aaPredicted RBP7.01□□□□□ -1.29
VPS13D-211ENST00000543710 OGG1O15527 345 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 OR7C1O76099 320 aaPredicted RBP7.01□□□□□ -1.29
VPS13D-211ENST00000543710 PF4V1P10720 104 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 RPL18Q07020 188 aaKnown RBP7.01□□□□□ -1.29
VPS13D-211ENST00000543710 VMA21Q3ZAQ7 101 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 OR5AP2Q8NGF4 316 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.01□□□□□ -1.29
VPS13D-211ENST00000543710 TXNDC17Q9BRA2 123 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 SEC11CQ9BY50 192 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 PILRBQ9UKJ0 227 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 A4GNTQ9UNA3 340 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 CCL26Q9Y258 94 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 A0A1W2PR48 441 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 PATE3B3GLJ2 98 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 FRS3O43559 492 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 EDIL3O43854 480 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 B4GALT3O60512 393 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 KLKB1P03952 638 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 ZNF90Q03938 601 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 ZNF705AQ6ZN79 300 aaPredicted RBP7.01□□□□□ -1.29
VPS13D-211ENST00000543710 HINT2Q9BX68 163 aa7.01□□□□□ -1.29
VPS13D-211ENST00000543710 M0QYG6 137 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 M0R135 149 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 IGHA1P01876 353 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 GYPBP06028 91 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 ACSM4P0C7M7 580 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 OR2B8PP59922 312 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 C1orf185Q5T7R7 199 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 PRAMEF5Q5TYX0 476 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 PRAMEF6Q5VXH4 476 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 TMEM65Q6PI78 240 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 ZNF799Q96GE5 643 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 PDGFBP01127 241 aaPredicted RBP7□□□□□ -1.29
VPS13D-211ENST00000543710 OR10J4P0C629 311 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 CD37P11049 281 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 HABP2Q14520 560 aaPredicted RBP7□□□□□ -1.29
VPS13D-211ENST00000543710 OR5T1Q8NG75 326 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 OR4S1Q8NGB4 309 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 OR51F2Q8NH61 342 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 NPRL2Q8WTW4 380 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 IL1F10Q8WWZ1 152 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 CLDN23Q96B33 292 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 TMEM167BQ9NRX6 74 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 IL17BQ9UHF5 180 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 CLEC2DQ9UHP7 191 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 LOC102724200A0A096LPH7 203 aaPredicted RBP7□□□□□ -1.29
VPS13D-211ENST00000543710 PDE6DO43924 150 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 CLDN14O95500 239 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 SFTA3P0C7M3 94 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 NPY4RP50391 375 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 TMEM183BQ1AE95 376 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 OR1L1Q8NH94 360 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 FAM216AQ8WUB2 273 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 Q9N2K0 584 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 HEYLQ9NQ87 328 aaPredicted RBP7□□□□□ -1.29
VPS13D-211ENST00000543710 A0A1W2PN81 502 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 ZNF724A8MTY0 619 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 SMIM6P0DI80 62 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 CHRNA7P36544 502 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 RAE1P78406 368 aaKnown RBP7□□□□□ -1.29
VPS13D-211ENST00000543710 DGCR2P98153 550 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 ZNF385BQ569K4 471 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 OR2I1PQ8NGU4 316 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 GABRG3Q99928 467 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 HINT3Q9NQE9 182 aaKnown RBP7□□□□□ -1.29
VPS13D-211ENST00000543710 MTFP1Q9UDX5 166 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 NAT8Q9UHE5 227 aa7□□□□□ -1.29
VPS13D-211ENST00000543710 LSM2Q9Y333 95 aaKnown RBP7□□□□□ -1.29
VPS13D-211ENST00000543710 TMEM272A0A1B0GTI8 110 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 OR5B21A6NL26 309 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 CA11O75493 328 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 DHRS3O75911 302 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 DUS4LO95620 317 aaKnown RBP6.99□□□□□ -1.29
VPS13D-211ENST00000543710 OPN1MWP04001 364 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 ANKRD34CP0C6C1 535 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 OPN1MW2P0DN77 364 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 OPN1MW3P0DN78 364 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 HOXA6P31267 233 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 CRYBB2P43320 205 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 SULT1A2P50226 295 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 IRF3Q14653 427 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 ACKR1Q16570 336 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 TCTN3Q6NUS6 607 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 SPACA3Q8IXA5 215 aa6.99□□□□□ -1.29
VPS13D-211ENST00000543710 GALMQ96C23 342 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms