RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 RDH10Q8IZV5 341 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 CIARTQ8N365 385 aaPredicted RBP16.37■□□□□ 0.21
DDX55-207ENST00000540763 RNF170Q96K19 258 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 PDCD1LG2Q9BQ51 273 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 PPP1R3EQ9H7J1 279 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 UBAP1Q9NZ09 502 aa16.37■□□□□ 0.21
DDX55-207ENST00000540763 IGHV4-61A0A0C4DH41 118 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 LRP5LA4QPB2 252 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 LALBAP00709 142 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 SERPINA3P01011 423 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 IGHV2-70P01814 119 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 PMELP40967 661 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 MPPED2Q15777 294 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 TMEM155Q4W5P6 130 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 UTS2BQ765I0 119 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 OR13C3Q8NGS6 347 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 ZNF420Q8TAQ5 688 aaPredicted RBP16.36■□□□□ 0.21
DDX55-207ENST00000540763 TREM2Q9NZC2 230 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 ERVK-18Q9QC07 812 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 RNF7Q9UBF6 113 aa16.36■□□□□ 0.21
DDX55-207ENST00000540763 LSM2Q9Y333 95 aaKnown RBP16.36■□□□□ 0.21
DDX55-207ENST00000540763 A6NLC8 198 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 PLPP2O43688 288 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 GRPP07492 148 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 ZNF20P17024 532 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 THBS2P35442 1172 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 BTG1P62324 171 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 CNN3Q15417 329 aaKnown RBP16.35■□□□□ 0.21
DDX55-207ENST00000540763 CEP78Q5JTW2 689 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 MOB3CQ70IA8 216 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 BIVMQ86UB2 503 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 MUC20Q8N307 709 aaPredicted RBP16.35■□□□□ 0.21
DDX55-207ENST00000540763 OR51A4Q8NGJ6 313 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 OR10AC1Q8NH08 325 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 GPR148Q8TDV2 347 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 SGCDQ92629 289 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 FGF23Q9GZV9 251 aaPredicted RBP16.35■□□□□ 0.21
DDX55-207ENST00000540763 UFSP2Q9NUQ7 469 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 DCAF16Q9NXF7 216 aa16.35■□□□□ 0.21
DDX55-207ENST00000540763 MT-ND2P03891 347 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 HEXAP06865 529 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 CPT2P23786 658 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 GPM6AP51674 278 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 SPHARQ15513 63 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 TBCEQ15813 527 aaPredicted RBP16.34■□□□□ 0.21
DDX55-207ENST00000540763 YIF1BQ5BJH7 314 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 C11orf53Q8IXP5 236 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 PARP16Q8N5Y8 322 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 OR10Z1Q8NGY1 313 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 ADAT3Q96EY9 351 aaPredicted RBP16.34■□□□□ 0.21
DDX55-207ENST00000540763 PGLYRP3Q96LB9 341 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 OR51I2Q9H344 312 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 ISYNA1Q9NPH2 558 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 GPR173Q9NS66 373 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 C1orf123Q9NWV4 160 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 DHDHQ9UQ10 334 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 ZNF281Q9Y2X9 895 aa16.34■□□□□ 0.21
DDX55-207ENST00000540763 SIRT4Q9Y6E7 314 aaPredicted RBP16.34■□□□□ 0.21
DDX55-207ENST00000540763 IGHV3-64DA0A0J9YX35 117 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 PQLC2LA1A4F0 135 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 ZNF732B4DXR9 585 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 H3BSH0 61 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 SMAD7O15105 426 aaKnown RBP16.33■□□□□ 0.2
DDX55-207ENST00000540763 LMX1BO60663 402 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 ALX3O95076 343 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 CYB5R3P00387 301 aaPredicted RBP16.33■□□□□ 0.2
DDX55-207ENST00000540763 EEF1B2P24534 225 aaKnown RBP16.33■□□□□ 0.2
DDX55-207ENST00000540763 MDH2P40926 338 aaKnown RBP16.33■□□□□ 0.2
DDX55-207ENST00000540763 UBE2V2Q15819 145 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 TMEM249Q2WGJ8 235 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 AVPI1Q5T686 147 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 WDR82Q6UXN9 313 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 KCTD8Q6ZWB6 473 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 LRRC28Q86X40 367 aaPredicted RBP16.33■□□□□ 0.2
DDX55-207ENST00000540763 ZNF573Q86YE8 665 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 SPICQ8N5J4 248 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 DNAAF1Q8NEP3 725 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 CLDND2Q8NHS1 167 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 TSEN15Q8WW01 171 aaKnown RBP16.33■□□□□ 0.2
DDX55-207ENST00000540763 RGP1Q92546 391 aaPredicted RBP16.33■□□□□ 0.2
DDX55-207ENST00000540763 THRSPQ92748 146 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 FGGYQ96C11 551 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 C1orf159Q96HA4 380 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 GSX1Q9H4S2 264 aaPredicted RBP16.33■□□□□ 0.2
DDX55-207ENST00000540763 SLC7A11Q9UPY5 501 aa16.33■□□□□ 0.2
DDX55-207ENST00000540763 PPIAL4EA0A075B759 164 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 PPIAL4DF5H284 164 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 LHBP01229 141 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 CD2P06729 351 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 PPIAL4FP0DN26 164 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 FUT6P51993 359 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 GPR50Q13585 617 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 ZMYND11Q15326 602 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 SERPINA12Q8IW75 414 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 GCSAMQ8N6F7 178 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 SCCPDHQ8NBX0 429 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 GHSRQ92847 366 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 SPSB1Q96BD6 273 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 RAB39BQ96DA2 213 aa16.32■□□□□ 0.2
DDX55-207ENST00000540763 OR5M11Q96RB7 305 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms