RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 CLINT1Q14677 625 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 ARL6IP1Q15041 203 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 PARM1Q6UWI2 310 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 OR51E1Q8TCB6 317 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 SLC25A43Q8WUT9 341 aaPredicted RBP15.53■□□□□ 0.08
RAB40C-205ENST00000539661 GNRHR2Q96P88 292 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 SMIM3Q9BZL3 60 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 LANCL2Q9NS86 450 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 HDGFL3Q9Y3E1 203 aa15.53■□□□□ 0.08
RAB40C-205ENST00000539661 TMEM184BQ9Y519 407 aaPredicted RBP15.53■□□□□ 0.08
RAB40C-205ENST00000539661 IGKV1D-43A0A0B4J1Z2 117 aa15.52■□□□□ 0.08
RAB40C-205ENST00000539661 A0A1W2PPE2 198 aa15.52■□□□□ 0.08
RAB40C-205ENST00000539661 TMEM150CB9EJG8 249 aa15.52■□□□□ 0.08
RAB40C-205ENST00000539661 CA11O75493 328 aa15.52■□□□□ 0.08
RAB40C-205ENST00000539661 HOXB2P14652 356 aa15.52■□□□□ 0.08
RAB40C-205ENST00000539661 PPA1Q15181 289 aa15.52■□□□□ 0.08
RAB40C-205ENST00000539661 RTL6Q6ICC9 239 aa15.52■□□□□ 0.08
RAB40C-205ENST00000539661 Q6ZSR6 202 aa15.52■□□□□ 0.08
RAB40C-205ENST00000539661 METTL27Q8N6F8 245 aaPredicted RBP15.52■□□□□ 0.08
RAB40C-205ENST00000539661 PHOSPHO2Q8TCD6 241 aa15.52■□□□□ 0.08
RAB40C-205ENST00000539661 PFDN5Q99471 154 aa15.52■□□□□ 0.08
RAB40C-205ENST00000539661 DDAH2O95865 285 aa15.52■□□□□ 0.07
RAB40C-205ENST00000539661 KNG1P01042 644 aa15.52■□□□□ 0.07
RAB40C-205ENST00000539661 CTSDP07339 412 aaPredicted RBP15.52■□□□□ 0.07
RAB40C-205ENST00000539661 CHATP28329 748 aa15.52■□□□□ 0.07
RAB40C-205ENST00000539661 DHPSP49366 369 aaPredicted RBP15.52■□□□□ 0.07
RAB40C-205ENST00000539661 CHRFAM7AQ494W8 412 aa15.52■□□□□ 0.07
RAB40C-205ENST00000539661 NCMAPQ5T1S8 102 aa15.52■□□□□ 0.07
RAB40C-205ENST00000539661 GPR157Q5UAW9 335 aa15.52■□□□□ 0.07
RAB40C-205ENST00000539661 RNF144BQ7Z419 303 aa15.52■□□□□ 0.07
RAB40C-205ENST00000539661 OR10S1Q8NGN2 331 aa15.52■□□□□ 0.07
RAB40C-205ENST00000539661 SPACA5Q96QH8 159 aa15.52■□□□□ 0.07
RAB40C-205ENST00000539661 NRSN2Q9GZP1 204 aa15.52■□□□□ 0.07
RAB40C-205ENST00000539661 LSM5Q9Y4Y9 91 aaKnown RBP15.52■□□□□ 0.07
RAB40C-205ENST00000539661 FOXI3A8MTJ6 420 aaPredicted RBP15.51■□□□□ 0.07
RAB40C-205ENST00000539661 RRP8O43159 456 aaKnown RBP15.51■□□□□ 0.07
RAB40C-205ENST00000539661 NDUFS6O75380 124 aaKnown RBP15.51■□□□□ 0.07
RAB40C-205ENST00000539661 OR2C1O95371 312 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 PLCXD2Q0VAA5 305 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 HLA-DQA1Q5Y7H0 255 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 GGNBP1Q5YKI7 109 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 H1FNTQ75WM6 255 aaPredicted RBP15.51■□□□□ 0.07
RAB40C-205ENST00000539661 LRRC18Q8N456 261 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 CD300LFQ8TDQ1 290 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 ERGIC1Q969X5 290 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 SLC2A4RGQ9NR83 387 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 HS3ST3A1Q9Y663 406 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 SERPINE3A8MV23 424 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 GPR137BO60478 399 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 HCKP08631 526 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 RPS23P62266 143 aaKnown RBP15.51■□□□□ 0.07
RAB40C-205ENST00000539661 TFF2Q03403 129 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 KIAA0141Q14154 515 aaPredicted RBP15.51■□□□□ 0.07
RAB40C-205ENST00000539661 SULF2Q8IWU5 870 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 MFSD8Q8NHS3 518 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 SSC4DQ8WTU2 575 aa15.51■□□□□ 0.07
RAB40C-205ENST00000539661 PARP12Q9H0J9 701 aaKnown RBP15.51■□□□□ 0.07
RAB40C-205ENST00000539661 CRYM-AS1A6NIL9 109 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 S100A2P29034 98 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 HSF1Q00613 529 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 OR51T1Q8NGJ9 327 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 TMEM234Q8WY98 164 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 C5orf34Q96MH7 638 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 TGM7Q96PF1 710 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 CHST5Q9GZS9 411 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 TCEAL2Q9H3H9 227 aaPredicted RBP15.5■□□□□ 0.07
RAB40C-205ENST00000539661 KLHL13Q9P2N7 655 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 ZNF878C9JN71 531 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 MASP2O00187 686 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 NME1P15531 152 aaKnown RBP15.5■□□□□ 0.07
RAB40C-205ENST00000539661 IL11P20809 199 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 CCL1P22362 96 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 ALDH3B1P43353 468 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 GABRA4P48169 554 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 DEFA6Q01524 100 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 PPP1R3BQ86XI6 285 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 GPER1Q99527 375 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 DECR2Q9NUI1 292 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 PARPBPQ9NWS1 579 aa15.5■□□□□ 0.07
RAB40C-205ENST00000539661 COL5A1P20908 1838 aaPredicted RBP15.5■□□□□ 0.07
RAB40C-205ENST00000539661 A0A1W2PP11 408 aa15.49■□□□□ 0.07
RAB40C-205ENST00000539661 DNLZQ5SXM8 178 aa15.49■□□□□ 0.07
RAB40C-205ENST00000539661 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.49■□□□□ 0.07
RAB40C-205ENST00000539661 ABHD12BQ7Z5M8 362 aaPredicted RBP15.49■□□□□ 0.07
RAB40C-205ENST00000539661 UNKLQ9H9P5 680 aaKnown RBP15.49■□□□□ 0.07
RAB40C-205ENST00000539661 TMED3Q9Y3Q3 217 aa15.49■□□□□ 0.07
RAB40C-205ENST00000539661 IGKV3D-11A0A0A0MRZ8 115 aa15.49■□□□□ 0.07
RAB40C-205ENST00000539661 CELA2BP08218 269 aaPredicted RBP15.49■□□□□ 0.07
RAB40C-205ENST00000539661 GPX4P36969 197 aaPredicted RBP15.49■□□□□ 0.07
RAB40C-205ENST00000539661 POU3F1Q03052 451 aaPredicted RBP15.49■□□□□ 0.07
RAB40C-205ENST00000539661 ACY1Q03154 408 aa15.49■□□□□ 0.07
RAB40C-205ENST00000539661 WDFY1Q8IWB7 410 aa15.49■□□□□ 0.07
RAB40C-205ENST00000539661 C9orf40Q8IXQ3 194 aa15.49■□□□□ 0.07
RAB40C-205ENST00000539661 DAZLQ92904 295 aaKnown RBP15.49■□□□□ 0.07
RAB40C-205ENST00000539661 PECRQ9BY49 303 aa15.49■□□□□ 0.07
RAB40C-205ENST00000539661 NKX2-4Q9H2Z4 354 aa15.49■□□□□ 0.07
RAB40C-205ENST00000539661 CHST11Q9NPF2 352 aa15.49■□□□□ 0.07
RAB40C-205ENST00000539661 GAR1Q9NY12 217 aaKnown RBP15.49■□□□□ 0.07
RAB40C-205ENST00000539661 CDC14CA4D256 554 aa15.48■□□□□ 0.07
RAB40C-205ENST00000539661 PRH1P02810 166 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms