RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 TREM2Q9NZC2 230 aa11.41□□□□□ -0.58
RPAIN-205ENST00000536255 NPTNQ9Y639 398 aa11.41□□□□□ -0.58
RPAIN-205ENST00000536255 SONP18583 2426 aaKnown RBP11.41□□□□□ -0.58
RPAIN-205ENST00000536255 ANK3Q12955 4377 aaKnown RBP11.41□□□□□ -0.58
RPAIN-205ENST00000536255 IGHV3-64DA0A0J9YX35 117 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 ANKRD61A6NGH8 418 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 OR5B21A6NL26 309 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 E9PI62 339 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 TMEM178BH3BS89 294 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 WNT9BO14905 357 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 ZFPL1O95159 310 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 GRPP07492 148 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 ZNF20P17024 532 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 EEF1B2P24534 225 aaKnown RBP11.4□□□□□ -0.58
RPAIN-205ENST00000536255 GNG3P63215 75 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 CDK5R1Q15078 307 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 KRTAP21-3Q3LHN1 58 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 AVPI1Q5T686 147 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 PRAMEF6Q5VXH4 476 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 TMEM42Q69YG0 159 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 MOB3CQ70IA8 216 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 NANOGP1Q8N7R0 232 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 OR1M1Q8NGA1 313 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 OR5A2Q8NGI9 324 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 OR13C3Q8NGS6 347 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 ZNF420Q8TAQ5 688 aaPredicted RBP11.4□□□□□ -0.58
RPAIN-205ENST00000536255 PP6455Q8WZ26 134 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 C1orf159Q96HA4 380 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 TMEM160Q9NX00 188 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 RNF7Q9UBF6 113 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 WIPI2Q9Y4P8 454 aa11.4□□□□□ -0.58
RPAIN-205ENST00000536255 hCG_1807616A0A1W2PRN6 198 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 ISPDA4D126 451 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 H3BSH0 61 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 OGG1O15527 345 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 LMX1BO60663 402 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 TGFAP01135 160 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 GPM6AP51674 278 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 GTF2A1P52655 376 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-205ENST00000536255 BTG1P62324 171 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 BDH1Q02338 343 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 ZNF154Q13106 437 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 MPPED2Q15777 294 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 CEP78Q5JTW2 689 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 PRSS48Q7RTY5 328 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 MUC20Q8N307 709 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-205ENST00000536255 LINC01356Q8N9X3 169 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 ZNF485Q8NCK3 441 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 TSEN15Q8WW01 171 aaKnown RBP11.39□□□□□ -0.59
RPAIN-205ENST00000536255 HPSE2Q8WWQ2 592 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 SMIM19Q96E16 107 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 PDCD1LG2Q9BQ51 273 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 YTHDF1Q9BYJ9 559 aaKnown RBP11.39□□□□□ -0.59
RPAIN-205ENST00000536255 CHST5Q9GZS9 411 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 CCDC90BQ9GZT6 254 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 PAK1IP1Q9NWT1 392 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-205ENST00000536255 C1orf123Q9NWV4 160 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 KCNS2Q9ULS6 477 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 SLC7A11Q9UPY5 501 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 DHDHQ9UQ10 334 aa11.39□□□□□ -0.59
RPAIN-205ENST00000536255 YLPM1P49750 1951 aaKnown RBP11.39□□□□□ -0.59
RPAIN-205ENST00000536255 A6NIN4 97 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 ZNF732B4DXR9 585 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 FSTL3O95633 263 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 MDH2P40926 338 aaKnown RBP11.38□□□□□ -0.59
RPAIN-205ENST00000536255 GABARAPL2P60520 117 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 LMO4P61968 165 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 CNN3Q15417 329 aaKnown RBP11.38□□□□□ -0.59
RPAIN-205ENST00000536255 KCNJ8Q15842 424 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 FAM76BQ5HYJ3 339 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 ZNF573Q86YE8 665 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 SPICQ8N5J4 248 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 RPS4Y2Q8TD47 263 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 GPR148Q8TDV2 347 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 RAB39BQ96DA2 213 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 GAL3ST1Q99999 423 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 TLNRD1Q9H1K6 362 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 PPP1R3EQ9H7J1 279 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 NEK6Q9HC98 313 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 GPR173Q9NS66 373 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 ERVK-18Q9QC07 812 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 CDC42EP3Q9UKI2 254 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 ZNF281Q9Y2X9 895 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 DYSFO75923 2080 aa11.38□□□□□ -0.59
RPAIN-205ENST00000536255 PPIAL4EA0A075B759 164 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 B4DSR2 109 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 PPIAL4DF5H284 164 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 MRPS14O60783 128 aaKnown RBP11.37□□□□□ -0.59
RPAIN-205ENST00000536255 CYB5R3P00387 301 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-205ENST00000536255 IGHV2-70P01814 119 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 CD2P06729 351 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 OCM2P0CE71 109 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 OCMP0CE72 109 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-205ENST00000536255 PPIAL4FP0DN26 164 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 THBS2P35442 1172 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 CFHR2P36980 270 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 PMELP40967 661 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 ACSM1Q08AH1 577 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 HNRNPA0Q13151 305 aaKnown RBP11.37□□□□□ -0.59
RPAIN-205ENST00000536255 IRF3Q14653 427 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms