RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 AKR7A2O43488 359 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 FBP1P09467 338 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 ANXA8P13928 327 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 PRKACGP22612 351 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 GUCA2AQ02747 115 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 OCLNQ16625 522 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 TMEM236Q5W0B7 351 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 KRT74Q7RTS7 529 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 ANGPTL6Q8NI99 470 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 LRTOMTQ8WZ04 291 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 H1FXQ92522 213 aaKnown RBP13.82□□□□□ -0.2
CPSF1-207ENST00000531727 GAFA1Q96PS6 74 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 HIST1H2AAQ96QV6 131 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 TEX12Q9BXU0 123 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 RNF114Q9Y508 228 aa13.82□□□□□ -0.2
CPSF1-207ENST00000531727 A0A0U1RQV5 110 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 ACOD1A6NK06 481 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 RNASEK-C17orf49H0YIS7 233 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 SIGLEC5O15389 551 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 TFF1P04155 84 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 EEF1B2P24534 225 aaKnown RBP13.81□□□□□ -0.2
CPSF1-207ENST00000531727 MAP2K3P46734 347 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 GPM6AP51674 278 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 APOFQ13790 326 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 DGUOKQ16854 277 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 DEGS2Q6QHC5 323 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 GDPGP1Q6ZNW5 385 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 PAPD5Q8NDF8 572 aaKnown RBP13.81□□□□□ -0.2
CPSF1-207ENST00000531727 LINC01006Q8NI28 216 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 FAM81AQ8TBF8 368 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 ITFG2Q969R8 447 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 YIPF3Q9GZM5 350 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 SEMA6AQ9H2E6 1030 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 YY1AP1Q9H869 796 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 ZNRD1Q9P1U0 126 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 NLKQ9UBE8 527 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 DNAJB9Q9UBS3 223 aa13.81□□□□□ -0.2
CPSF1-207ENST00000531727 SLC25A10Q9UBX3 287 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-207ENST00000531727 OR2AT4A6NND4 320 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 NPFFO15130 113 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 ACAA1P09110 424 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-207ENST00000531727 GLRA1P23415 457 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 HCCSP53701 268 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 DLX1P56177 255 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 CAV3P56539 151 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 KRTAP10-3P60369 221 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 GNG3P63215 75 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 CBX1P83916 185 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 PRB3Q04118 309 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-207ENST00000531727 KLRD1Q13241 179 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 TAF9Q16594 264 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 KCTD18Q6PI47 426 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-207ENST00000531727 C1orf122Q6ZSJ8 110 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 TRPM8Q7Z2W7 1104 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 SPATA24Q86W54 205 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 TNFRSF14Q92956 283 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 OR51I2Q9H344 312 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 FAM206AQ9NX38 181 aa13.8□□□□□ -0.2
CPSF1-207ENST00000531727 TMEM269A0A1B0GVZ9 245 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 ZNF732B4DXR9 585 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 M0QZ24 198 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 M0R1W7 72 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 TIMM23O14925 209 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 FKBP6O75344 327 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 RHBDL1O75783 438 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 CLPXO76031 633 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 ATP6V1B1P15313 513 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 NDUFB7P17568 137 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 PROK1P58294 105 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 DEFA6Q01524 100 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 FLOT2Q14254 428 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 SNAPC1Q16533 368 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 CEACAM21Q3KPI0 293 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 CEP78Q5JTW2 689 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 LCN1P1Q5VSP4 162 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 ZSCAN4Q8NAM6 433 aaPredicted RBP13.79□□□□□ -0.2
CPSF1-207ENST00000531727 DNAJC9Q8WXX5 260 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 TEAD3Q99594 435 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 MROQ9BYG7 248 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 PBOV1Q9GZY1 135 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 TVP23BQ9NYZ1 205 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 VPREB3Q9UKI3 123 aa13.79□□□□□ -0.2
CPSF1-207ENST00000531727 IGKV1D-17A0A075B6S4 117 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 A0A1W2PQ09 198 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 A0A1W2PRD5 423 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 A0A1W2PRF3 423 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 A0A1W2PRM7 423 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 TCRBV3S1A0A5B6 114 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 BTBD17A6NE02 478 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 CCDC182A6NF36 153 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 PSMD9O00233 223 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 ZNF254O75437 659 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 IGLV3-1P01715 115 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 MRPL3P09001 348 aaKnown RBP13.78□□□□□ -0.2
CPSF1-207ENST00000531727 PSG2P11465 335 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 SAA4P35542 130 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 GABRA2P47869 451 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 UBE2E1P51965 193 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 ROM1Q03395 351 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 DNAL1Q4LDG9 190 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms