RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	AQP3	Q92482	292 aa		9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	HAS2	Q92819	552 aa		9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZNF837	Q96EG3	531 aa	Predicted RBP	9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	BORCS8	Q96FH0	119 aa		9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	LYZL4	Q96KX0	146 aa		9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	GON7	Q9BXV9	100 aa		9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	SELENOI	Q9C0D9	397 aa		9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	METTL9	Q9H1A3	318 aa		9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	DEFB127	Q9H1M4	99 aa		9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	CLEC4M	Q9H2X3	399 aa	Predicted RBP	9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	RNF122	Q9H9V4	155 aa		9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	ACKR4	Q9NPB9	350 aa		9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZNF319	Q9P2F9	582 aa		9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	MGAT4A	Q9UM21	535 aa		9.41	□□□□□ -0.9
SPIDR-222	ENST00000524006	MED12L	Q86YW9	2145 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	PIEZO2	Q9H5I5	2752 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZNF816-ZNF321P	A0A0X1KG74	233 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	CDRT15L2	A8MXV6	281 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	C1QL1	O75973	258 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	IGLV3-1	P01715	115 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	GSTT2	P0CG29	244 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	MGMT	P16455	207 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	PTGFR	P43088	359 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	OR3A3	P47888	321 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	OR3A2	P47893	321 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	CCL11	P51671	97 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	TAS2R46	P59540	309 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	TSPAN5	P62079	268 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	PSG4	Q00888	419 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	TGIF1	Q15583	401 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	C3AR1	Q16581	482 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	NKPD1	Q17RQ9	610 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	HYAL4	Q2M3T9	481 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZNF260	Q3ZCT1	412 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	LIN54	Q6MZP7	749 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	PLXDC2	Q6UX71	529 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	NAA40	Q86UY6	237 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	SKA3	Q8IX90	412 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	FTMT	Q8N4E7	242 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZFP62	Q8NB50	900 aa	Predicted RBP	9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	OR2T35	Q8NGX2	323 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	OR2AE1	Q8NHA4	323 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	SNAPC3	Q92966	411 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	CMBL	Q96DG6	245 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	SCGB3A2	Q96PL1	93 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	WNT5B	Q9H1J7	359 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	POFUT1	Q9H488	388 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	PRORY	Q9H606	182 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	EIF3K	Q9UBQ5	218 aa	Known RBP	9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZNF175	Q9Y473	711 aa		9.4	□□□□□ -0.9
SPIDR-222	ENST00000524006	FREM1	Q5H8C1	2179 aa		9.4	□□□□□ -0.91
SPIDR-222	ENST00000524006	TNRC6A	Q8NDV7	1962 aa	Known RBP	9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	BOD1L1	Q8NFC6	3051 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	BSN	Q9UPA5	3926 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	TRAV17	A0A0B4J275	112 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006		F5H5P2	479 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	RAB27B	O00194	218 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	GOSR2	O14653	212 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	ZNF780A	O75290	641 aa	Predicted RBP	9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	HTR3B	O95264	441 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	PLAT	P00750	562 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	NRAS	P01111	189 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	CD74	P04233	296 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	PATE4	P0C8F1	98 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	CCNO	P22674	350 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	HOXC12	P31275	282 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	APLNR	P35414	380 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	EIF2S3	P41091	472 aa	Known RBP	9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	RBP2	P50120	134 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	MECP2	P51608	486 aa	Known RBP	9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	GMFB	P60983	142 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	RPS27A	P62979	156 aa	Known RBP	9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	CXADR	P78310	365 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	QRFP	P83859	136 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	PPA1	Q15181	289 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	SF3B4	Q15427	424 aa	Known RBP eCLIP	9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	NKAPL	Q5M9Q1	402 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	LCE2D	Q5TA82	110 aa	Predicted RBP	9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	ZBTB37	Q5TC79	503 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	MOB3C	Q70IA8	216 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	ZNF767P	Q75MW2	155 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	BIVM	Q86UB2	503 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	DTX1	Q86Y01	620 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	LYPD6	Q86Y78	171 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	ZDHHC22	Q8N966	263 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	OR4D10	Q8NGI6	311 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	OR4K15	Q8NH41	348 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	ASB13	Q8WXK3	278 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	SGK3	Q96BR1	496 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	NICN1	Q9BSH3	213 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	SOX7	Q9BT81	388 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	TINAGL1	Q9GZM7	467 aa	Predicted RBP	9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	PRDM14	Q9GZV8	571 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	LPAR5	Q9H1C0	372 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	OPA3	Q9H6K4	179 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	C12orf49	Q9H741	205 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	BCO1	Q9HAY6	547 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	PLSCR3	Q9NRY6	295 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	SLC7A10	Q9NS82	523 aa		9.39	□□□□□ -0.91
SPIDR-222	ENST00000524006	HECTD1	Q9ULT8	2610 aa		9.39	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms