RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 LRRTM1Q86UE6 522 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 PIGZQ86VD9 579 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR6V1Q8N148 313 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 LYG1Q8N1E2 194 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 GPD1LQ8N335 351 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 SLC35G3Q8N808 338 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 RNF149Q8NC42 400 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 TMEM116Q8NCL8 245 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR4S1Q8NGB4 309 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR52B6Q8NGF0 335 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR52E4Q8NGH9 312 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR4P4Q8NGL7 312 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR4D5Q8NGN0 318 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR1L6Q8NGR2 347 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR1J2Q8NGS2 313 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 SLC7A13Q8TCU3 470 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 MCHR2Q969V1 340 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 PINX1Q96BK5 328 aaKnown RBP4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 RAB39BQ96DA2 213 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 LMLNQ96KR4 655 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 JSRP1Q96MG2 331 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 CCDC115Q96NT0 180 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR2A7Q96R45 310 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 PANX1Q96RD7 426 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 CLCC1Q96S66 551 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 LYSMD1Q96S90 227 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 COPS8Q99627 209 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 PITX2Q99697 317 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 SOSTQ9BQB4 213 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 NAA11Q9BSU3 229 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 MS4A8Q9BY19 250 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 METTL17Q9H7H0 456 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 GEMIN7Q9H840 131 aaKnown RBP4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 WDR54Q9H977 334 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 RPS10P5Q9NQ39 176 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 CBLN4Q9NTU7 201 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 MTCH1Q9NZJ7 389 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 IL17CQ9P0M4 197 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 CD84Q9UIB8 345 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 FBXW2Q9UKT8 454 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 RNF150Q9ULK6 438 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 DOCK1Q14185 1865 aa4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 BAZ2BQ9UIF8 2168 aaKnown RBP4.04□□□□□ -1.76
HMGB3P13-201ENST00000511263 TRAV26-1A0A087WT03 109 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 A0A0G2JN53 185 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 EDDM13A0A1B0GTR0 161 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ANKRD20A5PA0PJZ0 165 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 SMIM30A4D0T7 59 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 NKX2-6A6NCS4 301 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 LIPT2A6NK58 231 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR6C76A6NM76 312 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 IFITM10A6NMD0 228 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 YJEFN3A6XGL0 299 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 G3V3Q6 166 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 CORTO00230 105 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 CCL25O15444 150 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 BCL2L11O43521 198 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 PDE6DO43924 150 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR7C2O60412 319 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 CREBL2O60519 120 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 REM1O75628 298 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ADAP1O75689 374 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 GLSO94925 669 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR2C1O95371 312 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 TSPAN13O95857 204 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 IL5P05113 134 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 SMIM17P0DL12 118 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR5H8P0DN80 308 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 PNMTP11086 282 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 CD79AP11912 226 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 IL1RNP18510 177 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 CD22P20273 847 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 HRH2P25021 359 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 RBMS1P29558 406 aaKnown RBP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 CMPK1P30085 196 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR10J1P30954 320 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 SNCAP37840 140 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 CEACAM3P40198 252 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 RPL29P47914 159 aaKnown RBP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 CSNK1A1P48729 337 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 RAB9AP51151 201 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 VAMP7P51809 220 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 AKR1C2P52895 323 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 F2RL1P55085 397 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 PIGPP57054 158 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ST8SIA6P61647 398 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 MRPS6P82932 125 aaKnown RBP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 NAAAQ02083 359 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 PAX5Q02548 391 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 PAX2Q02962 417 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 NSDHLQ15738 373 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 UBE2V2Q15819 145 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ZBTB6Q15916 424 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 TMEM183BQ1AE95 376 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 GSG1Q2KHT4 349 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 SLC36A2Q495M3 483 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 RAB6CQ53S08 254 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 TMEM255AQ5JRV8 349 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 CTSL3PQ5NE16 218 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 RAET1LQ5VY80 246 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms