RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 LYZL2Q7Z4W2 148 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 IL22RA1Q8N6P7 574 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 M1APQ8TC57 530 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 C22orf15Q8WYQ4 148 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 MS4A6EQ96DS6 147 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF385AQ96PM9 386 aaKnown RBP6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 AQP10Q96PS8 301 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 NIPSNAP3BQ9BS92 247 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 PARD6AQ9NPB6 346 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 WSB1Q9Y6I7 421 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 PLXNA3P51805 1871 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 C17orf105B2RV13 164 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 DFFBO76075 338 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 OR6A2O95222 327 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF888P0CJ79 500 aaPredicted RBP6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 TBPP20226 339 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 GZMHP20718 246 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 BCKDHBP21953 392 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 PMELP40967 661 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 RRADP55042 308 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 TMEM128Q5BJH2 165 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 TMEM215Q68D42 235 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 MEX3BQ6ZN04 569 aaKnown RBP6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 RABEPKQ7Z6M1 372 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 ANGPTL5Q86XS5 388 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 APOBEC3FQ8IUX4 373 aaKnown RBP6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 SFTPA1Q8IWL2 248 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 ATOH7Q8N100 152 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 TMEM52Q8NDY8 209 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 OR52M1Q8NGK5 317 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 ASB5Q8WWX0 329 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 RCC1LQ96I51 464 aaKnown RBP6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 C2orf50Q96LR7 162 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 PRRX2Q99811 253 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 FAM103A1Q9BTL3 118 aaKnown RBP6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 NMES1Q9C002 83 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 SLCO5A1Q9H2Y9 848 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 EHFQ9NZC4 300 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 ERRFI1Q9UJM3 462 aaPredicted RBP6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 HEBP2Q9Y5Z4 205 aa6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF106Q9H2Y7 1883 aaKnown RBP6.43□□□□□ -1.38
LIMCH1-207ENST00000508466 IGKV1D-8A0A087WSZ0 117 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 NUDT19A8MXV4 375 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 P2RX6O15547 441 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 DUSP11O75319 330 aaKnown RBP6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF217O75362 1048 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 IL2RAP01589 272 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 OPN1LWP04000 364 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 LCATP04180 440 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 DANCRP0C864 163 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 ANOS1P23352 680 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 BRS3P32247 399 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 ERVFC1-1P60608 527 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 MGAT2Q10469 447 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 GPR18Q14330 331 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC48A1Q6P1K1 146 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 SSX7Q7RTT5 188 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 TMPRSS7Q7RTY8 843 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 C1QL4Q86Z23 238 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 OR1P1Q8NH06 330 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 OR4C3Q8NH37 302 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 VN1R17PQ8TDU5 208 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 NOL4LQ96MY1 436 aaPredicted RBP6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF160Q9HCG1 818 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 FKBP11Q9NYL4 201 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF581Q9P0T4 197 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 LRIT1Q9P2V4 623 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 COL4A3Q01955 1670 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 A0A1W2PRU2 124 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 GPR137BO60478 399 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC16A7O60669 478 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 JTBO76095 146 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 SFT2D2O95562 160 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 DBHP09172 617 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 H2BFMP0C1H6 154 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 RPS2P15880 293 aaKnown RBP6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 AMY2BP19961 511 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 MSX1P28360 303 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 CHRNB4P30926 498 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 OPRM1P35372 400 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 RAB7AP51149 207 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 EMP2P54851 167 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 CSNK2A1P68400 391 aaPredicted RBP6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 DCAF10Q5QP82 559 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 ABHD17CQ6PCB6 329 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 UNQ5815/PRO19632Q6UWF5 114 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 C20orf196Q8IYI0 205 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 LYG1Q8N1E2 194 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 POC1AQ8NBT0 407 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 CSNK2A3Q8NEV1 391 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 OR13G1Q8NGZ3 307 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 C15orf40Q8WUR7 153 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 LCN9Q8WX39 176 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 DYRK2Q92630 601 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 MCHR2Q969V1 340 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 ARHGAP5-AS1Q96IT6 56 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 SHDQ96IW2 340 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 C4orf45Q96LM5 186 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 TP53RKQ96S44 253 aa6.42□□□□□ -1.38
LIMCH1-207ENST00000508466 AK3Q9UIJ7 227 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms