RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 ADIGQ0VDE8 80 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 PRDX4Q13162 271 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 ENDOGQ14249 297 aaKnown RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 CCDC183Q5T5S1 534 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 TMEM236Q5W0B7 351 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 RWDD4Q6NW29 188 aaKnown RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 CASC1Q6TDU7 716 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 TMEM144Q7Z5S9 345 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 WDR31Q8NA23 367 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 TTC29Q8NA56 475 aaPredicted RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 OR13C2Q8NGS9 318 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 ITLN2Q8WWU7 325 aaPredicted RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 ELMO1Q92556 727 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 SLC38A4Q969I6 547 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 RPEQ96AT9 228 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 XPO6Q96QU8 1125 aaKnown RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 TRIB3Q96RU7 358 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 CRACR2AQ9BSW2 395 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 LRRC19Q9H756 370 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 ZNF286AQ9HBT8 521 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 HEBP1Q9NRV9 189 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 RBFOX1Q9NWB1 397 aaKnown RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 BLOC1S6Q9UL45 172 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 CHTOPQ9Y3Y2 248 aaKnown RBP0.41□□□□□ -2.34
CCDC93-209ENST00000488908 ICOSQ9Y6W8 199 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 PLXNA3P51805 1871 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 SIGLEC1Q9BZZ2 1709 aa0.41□□□□□ -2.34
CCDC93-209ENST00000488908 CR1P17927 2039 aa0.4□□□□□ -2.34
CCDC93-209ENST00000488908 LAMB2P55268 1798 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 C2orf16Q68DN1 1984 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 IGHV6-1A0A0B4J1U7 121 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 A0A1B0GU33 70 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 TSPAN11A1L157 253 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 LEUTXA8MZ59 168 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 H0Y8G0 127 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 SLC9A3R1O14745 358 aaPredicted RBP0.4□□□□□ -2.35
CCDC93-209ENST00000488908 CTNSO60931 367 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 WBP4O75554 376 aaKnown RBP0.4□□□□□ -2.35
CCDC93-209ENST00000488908 CXorf1O96002 111 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 CXCR1P25024 350 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 SLC6A1P30531 599 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 TUFMP49411 452 aaKnown RBP0.4□□□□□ -2.35
CCDC93-209ENST00000488908 SULT1E1P49888 294 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 RAB9AP51151 201 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 AP1S2P56377 157 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 GRB2P62993 217 aaKnown RBP0.4□□□□□ -2.35
CCDC93-209ENST00000488908 SELENBP1Q13228 472 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 TFDP2Q14188 446 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 OR1Q1Q15612 314 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 KLHL40Q2TBA0 621 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 WDR82Q6UXN9 313 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 VKORC1L1Q8N0U8 176 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF567Q8N184 647 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 OR8A1Q8NGG7 326 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 ORAOV1Q8WV07 137 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 ASZ1Q8WWH4 475 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 RAD51AP1Q96B01 352 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 SMARCD1Q96GM5 515 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 RDH12Q96NR8 316 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 DERL3Q96Q80 235 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 TXNDC17Q9BRA2 123 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 NT5C3AQ9H0P0 336 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 NEUROG2Q9H2A3 272 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 ABCB9Q9NP78 766 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 AGPAT4Q9NRZ5 378 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 CA10Q9NS85 328 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 MRPL16Q9NX20 251 aaKnown RBP0.4□□□□□ -2.35
CCDC93-209ENST00000488908 COX16Q9P0S2 106 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 PITPNC1Q9UKF7 332 aa0.4□□□□□ -2.35
CCDC93-209ENST00000488908 IGKV1D-43A0A0B4J1Z2 117 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 C19orf71A6NCJ1 209 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 K7ERS5 55 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 UPK1BO75841 260 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 FTH1P02794 183 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 CDK1P06493 297 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 OR4Q2P0C623 313 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 MLNP12872 115 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 HOXB8P17481 243 aaPredicted RBP0.39□□□□□ -2.35
CCDC93-209ENST00000488908 HLA-GP17693 338 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 BCKDHBP21953 392 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF140P52738 457 aaPredicted RBP0.39□□□□□ -2.35
CCDC93-209ENST00000488908 OR2B8PP59922 312 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 ACTR3P61158 418 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 RAB11AP62491 216 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 INCA1Q0VD86 236 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 HSDL1Q3SXM5 330 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 STEAP4Q687X5 459 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 TTC19Q6DKK2 380 aaPredicted RBP0.39□□□□□ -2.35
CCDC93-209ENST00000488908 RGS9BPQ6ZS82 235 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF767PQ75MW2 155 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 LYZL2Q7Z4W2 148 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 LYPD6Q86Y78 171 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 SLC22A9Q8IVM8 553 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 JAGN1Q8N5M9 183 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 ZDHHC22Q8N966 263 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 ZNF738Q8NE65 137 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 OR2M7Q8NG81 312 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 OR4C5Q8NGB2 326 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 OR5H2Q8NGV7 314 aa0.39□□□□□ -2.35
CCDC93-209ENST00000488908 RNASE11Q8TAA1 199 aaKnown RBP0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms