RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ABCB9Q9NP78 766 aa17.27■□□□□ 0.36
COL9A3-207ENST00000467819 KLHDC2Q9Y2U9 406 aa17.27■□□□□ 0.36
COL9A3-207ENST00000467819 A0A1W2PQ09 198 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 MEIOCA2RUB1 952 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 PAHP00439 452 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 CST4P01036 141 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 CST1P01037 141 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 RAP2AP10114 183 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 SAA4P35542 130 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 PSMA6P60900 246 aaKnown RBP17.26■□□□□ 0.35
COL9A3-207ENST00000467819 GINS1Q14691 196 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 ZDHHC23Q8IYP9 409 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 ZNF454Q8N9F8 522 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 ANGPTL6Q8NI99 470 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 CCDC124Q96CT7 223 aaKnown RBP17.26■□□□□ 0.35
COL9A3-207ENST00000467819 MED30Q96HR3 178 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 NSL1Q96IY1 281 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 LRGUKQ96M69 825 aa17.26■□□□□ 0.35
COL9A3-207ENST00000467819 TSPAN15O95858 294 aa17.25■□□□□ 0.35
COL9A3-207ENST00000467819 GABRA2P47869 451 aa17.25■□□□□ 0.35
COL9A3-207ENST00000467819 GPM6AP51674 278 aa17.25■□□□□ 0.35
COL9A3-207ENST00000467819 TMEM179BQ7Z7N9 219 aa17.25■□□□□ 0.35
COL9A3-207ENST00000467819 FAM81AQ8TBF8 368 aa17.25■□□□□ 0.35
COL9A3-207ENST00000467819 TNFRSF14Q92956 283 aa17.25■□□□□ 0.35
COL9A3-207ENST00000467819 HIST1H2AAQ96QV6 131 aa17.25■□□□□ 0.35
COL9A3-207ENST00000467819 C16orf95Q9H693 158 aa17.25■□□□□ 0.35
COL9A3-207ENST00000467819 ELL3Q9HB65 397 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-207ENST00000467819 NLKQ9UBE8 527 aa17.25■□□□□ 0.35
COL9A3-207ENST00000467819 LRP12Q9Y561 859 aa17.25■□□□□ 0.35
COL9A3-207ENST00000467819 ZNF816-ZNF321PA0A0X1KG74 233 aa17.24■□□□□ 0.35
COL9A3-207ENST00000467819 SLC22A31A6NKX4 558 aa17.24■□□□□ 0.35
COL9A3-207ENST00000467819 OR2AT4A6NND4 320 aa17.24■□□□□ 0.35
COL9A3-207ENST00000467819 SIGLEC5O15389 551 aa17.24■□□□□ 0.35
COL9A3-207ENST00000467819 RHBDL1O75783 438 aa17.24■□□□□ 0.35
COL9A3-207ENST00000467819 GLRA1P23415 457 aa17.24■□□□□ 0.35
COL9A3-207ENST00000467819 DCTDP32321 178 aa17.24■□□□□ 0.35
COL9A3-207ENST00000467819 RPS7P62081 194 aaKnown RBP17.24■□□□□ 0.35
COL9A3-207ENST00000467819 GK3PQ14409 553 aa17.24■□□□□ 0.35
COL9A3-207ENST00000467819 FAM76BQ5HYJ3 339 aa17.24■□□□□ 0.35
COL9A3-207ENST00000467819 CPOQ8IVL8 374 aa17.24■□□□□ 0.35
COL9A3-207ENST00000467819 BBS1Q8NFJ9 593 aa17.24■□□□□ 0.35
COL9A3-207ENST00000467819 CHID1Q9BWS9 393 aa17.24■□□□□ 0.35
COL9A3-207ENST00000467819 ARRDC5A6NEK1 342 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 ANKRD61A6NGH8 418 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 M0R1W7 72 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 GNGT2O14610 69 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 PRODHO43272 600 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 ACAA1P09110 424 aaPredicted RBP17.23■□□□□ 0.35
COL9A3-207ENST00000467819 UBE2E1P51965 193 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 CAV3P56539 151 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 EGR3Q06889 387 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 DMRTC1Q5HYR2 192 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 CEP78Q5JTW2 689 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 KRT77Q7Z794 578 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 ADGRG5Q8IZF4 528 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 TMEM185AQ8NFB2 350 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 FAM110DQ8TAY7 271 aaPredicted RBP17.23■□□□□ 0.35
COL9A3-207ENST00000467819 ASB9Q96DX5 294 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 DUS3LQ96G46 650 aaKnown RBP17.23■□□□□ 0.35
COL9A3-207ENST00000467819 CLPTM1LQ96KA5 538 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 PPA2Q9H2U2 334 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 METTL8Q9H825 291 aaKnown RBP17.23■□□□□ 0.35
COL9A3-207ENST00000467819 NIPAL2Q9H841 368 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 LAMP5Q9UJQ1 280 aa17.23■□□□□ 0.35
COL9A3-207ENST00000467819 ZNF732B4DXR9 585 aa17.22■□□□□ 0.35
COL9A3-207ENST00000467819 PSMD9O00233 223 aa17.22■□□□□ 0.35
COL9A3-207ENST00000467819 TSPAN9O75954 239 aa17.22■□□□□ 0.35
COL9A3-207ENST00000467819 TGFBR2P37173 567 aa17.22■□□□□ 0.35
COL9A3-207ENST00000467819 HCCSP53701 268 aa17.22■□□□□ 0.35
COL9A3-207ENST00000467819 BLMHQ13867 455 aa17.22■□□□□ 0.35
COL9A3-207ENST00000467819 NCR3LG1Q68D85 454 aa17.22■□□□□ 0.35
COL9A3-207ENST00000467819 C1orf122Q6ZSJ8 110 aa17.22■□□□□ 0.35
COL9A3-207ENST00000467819 COMMD2Q86X83 199 aa17.22■□□□□ 0.35
COL9A3-207ENST00000467819 C1QL4Q86Z23 238 aa17.22■□□□□ 0.35
COL9A3-207ENST00000467819 ZNRF1Q8ND25 227 aa17.22■□□□□ 0.35
COL9A3-207ENST00000467819 PAPD5Q8NDF8 572 aaKnown RBP17.22■□□□□ 0.35
COL9A3-207ENST00000467819 OR5R1Q8NH85 324 aa17.22■□□□□ 0.35
COL9A3-207ENST00000467819 IGKV1D-17A0A075B6S4 117 aa17.21■□□□□ 0.35
COL9A3-207ENST00000467819 H0YAE9 185 aa17.21■□□□□ 0.35
COL9A3-207ENST00000467819 HMGN1P05114 100 aa17.21■□□□□ 0.35
COL9A3-207ENST00000467819 PSG2P11465 335 aa17.21■□□□□ 0.35
COL9A3-207ENST00000467819 OSMP13725 252 aa17.21■□□□□ 0.35
COL9A3-207ENST00000467819 MAP2K3P46734 347 aa17.21■□□□□ 0.35
COL9A3-207ENST00000467819 GNG3P63215 75 aa17.21■□□□□ 0.35
COL9A3-207ENST00000467819 ACSM1Q08AH1 577 aa17.21■□□□□ 0.35
COL9A3-207ENST00000467819 SLC35D3Q5M8T2 416 aa17.21■□□□□ 0.35
COL9A3-207ENST00000467819 HS3ST5Q8IZT8 346 aa17.21■□□□□ 0.35
COL9A3-207ENST00000467819 FAM185AQ8N0U4 392 aa17.21■□□□□ 0.35
COL9A3-207ENST00000467819 ZNF556Q9HAH1 456 aa17.21■□□□□ 0.35
COL9A3-207ENST00000467819 H3BUX3 64 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 E2F6O75461 281 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 ALOX5APP20292 161 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 CALB2P22676 271 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 CAPZA1P52907 286 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 CDK5Q00535 292 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 APOFQ13790 326 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 C2orf68Q2NKX9 166 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 TMEM236Q5W0B7 351 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 SLC35E4Q6ICL7 350 aa17.2■□□□□ 0.34
COL9A3-207ENST00000467819 CANT1Q8WVQ1 401 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms