RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 ZNF404Q494X3 552 aa13.24□□□□□ -0.29
SF3A3-203ENST00000461869 FAM27D1Q5T7N8 215 aa13.24□□□□□ -0.29
SF3A3-203ENST00000461869 UNQ6126/PRO20091Q6UXV3 157 aa13.24□□□□□ -0.29
SF3A3-203ENST00000461869 C12orf54Q6X4T0 127 aa13.24□□□□□ -0.29
SF3A3-203ENST00000461869 OR10AC1Q8NH08 325 aa13.24□□□□□ -0.29
SF3A3-203ENST00000461869 MCFD2Q8NI22 146 aa13.24□□□□□ -0.29
SF3A3-203ENST00000461869 PPP1R14AQ96A00 147 aa13.24□□□□□ -0.29
SF3A3-203ENST00000461869 APOBEC3DQ96AK3 386 aaPredicted RBP13.24□□□□□ -0.29
SF3A3-203ENST00000461869 SLIRPQ9GZT3 109 aaKnown RBP13.24□□□□□ -0.29
SF3A3-203ENST00000461869 PLK3Q9H4B4 646 aa13.24□□□□□ -0.29
SF3A3-203ENST00000461869 CDH20Q9HBT6 801 aa13.24□□□□□ -0.29
SF3A3-203ENST00000461869 FOXJ3Q9UPW0 622 aa13.24□□□□□ -0.29
SF3A3-203ENST00000461869 ARFGEF3Q5TH69 2177 aa13.24□□□□□ -0.29
SF3A3-203ENST00000461869 LOC100509620A0A075B734 347 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 A0A1B0GTI1 187 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 DHRS3O75911 302 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 IGKV3-15P01624 115 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 ERCC1P07992 297 aaPredicted RBP13.23□□□□□ -0.29
SF3A3-203ENST00000461869 DAOP14920 347 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 GIFP27352 417 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 IL2RGP31785 369 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 NAAAQ02083 359 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 HNRNPA0Q13151 305 aaKnown RBP13.23□□□□□ -0.29
SF3A3-203ENST00000461869 GFOD2Q3B7J2 385 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 COLCA1Q6ZS62 124 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 ZNF584Q8IVC4 421 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 PARP16Q8N5Y8 322 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 LINC01356Q8N9X3 169 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 PLPP7Q8NBV4 271 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 OR5L1Q8NGL2 311 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 HPS1Q92902 700 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 ZNF75AQ96N20 296 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 MMP27Q9H306 513 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 TPK1Q9H3S4 243 aa13.23□□□□□ -0.29
SF3A3-203ENST00000461869 ZNF275Q9NSD4 429 aaPredicted RBP13.23□□□□□ -0.29
SF3A3-203ENST00000461869 CRNNQ9UBG3 495 aaPredicted RBP13.23□□□□□ -0.29
SF3A3-203ENST00000461869 EIF3KQ9UBQ5 218 aaKnown RBP13.23□□□□□ -0.29
SF3A3-203ENST00000461869 FBXO9Q9UK97 447 aaPredicted RBP13.23□□□□□ -0.29
SF3A3-203ENST00000461869 A0A075B6Q4 140 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 A0A1W2PPK0 400 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 ANKRD61A6NGH8 418 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 PIN1P1O15428 100 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 WIPF1O43516 503 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 ICMTO60725 284 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 LILRA1O75019 489 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 CECR9P0C854 216 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 CCNOP22674 350 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 CFPP27918 469 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 RANBP1P43487 201 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 PPP3R1P63098 170 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 HGFACQ04756 655 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 SNAI3Q3KNW1 292 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 Q6ZSR3 168 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 PGAP1Q75T13 922 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 SERPINA12Q8IW75 414 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.22□□□□□ -0.29
SF3A3-203ENST00000461869 NEU4Q8WWR8 484 aaPredicted RBP13.22□□□□□ -0.29
SF3A3-203ENST00000461869 KCTD12Q96CX2 325 aaKnown RBP13.22□□□□□ -0.29
SF3A3-203ENST00000461869 REEP6Q96HR9 211 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 FAM71F1Q96KD3 344 aaPredicted RBP13.22□□□□□ -0.29
SF3A3-203ENST00000461869 PPIL3Q9H2H8 161 aaKnown RBP13.22□□□□□ -0.29
SF3A3-203ENST00000461869 TBCCD1Q9NVR7 557 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 ZNF319Q9P2F9 582 aa13.22□□□□□ -0.29
SF3A3-203ENST00000461869 SHISA3A0PJX4 238 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 MEGF11A6BM72 1044 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 ANXA2P2A6NMY6 339 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 NOTOA8MTQ0 251 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 VSTM5A8MXK1 200 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 IGLV1-44P01699 117 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 CALCRP30988 508 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 THBS4P35443 961 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 GNALP38405 381 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 DYNC1I2Q13409 638 aaKnown RBP13.21□□□□□ -0.29
SF3A3-203ENST00000461869 LSAMPQ13449 338 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 NAA40Q86UY6 237 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 C1orf174Q8IYL3 243 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 ZCCHC24Q8N2G6 241 aaKnown RBP13.21□□□□□ -0.29
SF3A3-203ENST00000461869 NKAIN3Q8N8D7 197 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 OR5D14Q8NGL3 314 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 ACOT12Q8WYK0 555 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 PP6455Q8WZ26 134 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 SPSB4Q96A44 273 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 NXF2Q9GZY0 626 aaKnown RBP13.21□□□□□ -0.29
SF3A3-203ENST00000461869 OCEL1Q9H607 264 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 NEK6Q9HC98 313 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 METRNQ9UJH8 293 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 V9GYS6 101 aa13.21□□□□□ -0.29
SF3A3-203ENST00000461869 H3BSH0 61 aa13.2□□□□□ -0.3
SF3A3-203ENST00000461869 SPRY1O43609 319 aaPredicted RBP13.2□□□□□ -0.3
SF3A3-203ENST00000461869 CLEC2LP0C7M8 214 aa13.2□□□□□ -0.3
SF3A3-203ENST00000461869 IGFBP3P17936 291 aaPredicted RBP13.2□□□□□ -0.3
SF3A3-203ENST00000461869 S100A5P33763 92 aa13.2□□□□□ -0.3
SF3A3-203ENST00000461869 MAP2K3P46734 347 aa13.2□□□□□ -0.3
SF3A3-203ENST00000461869 CEP78Q5JTW2 689 aa13.2□□□□□ -0.3
SF3A3-203ENST00000461869 GLYATL3Q5SZD4 288 aa13.2□□□□□ -0.3
SF3A3-203ENST00000461869 SFXN4Q6P4A7 337 aa13.2□□□□□ -0.3
SF3A3-203ENST00000461869 MZT2AQ6P582 158 aa13.2□□□□□ -0.3
SF3A3-203ENST00000461869 NUP37Q8NFH4 326 aa13.2□□□□□ -0.3
SF3A3-203ENST00000461869 SEMA6DQ8NFY4 1073 aa13.2□□□□□ -0.3
SF3A3-203ENST00000461869 OR14K1Q8NGZ2 314 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms