RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 IL1RL1Q01638 556 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 PRB3Q04118 309 aaPredicted RBP0.62□□□□□ -2.31
LRCH3-209ENST00000452660 REG3AQ06141 175 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 TNFRSF9Q07011 255 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 TRDNQ13061 729 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 XRCC4Q13426 336 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 GRB7Q14451 532 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 LASP1Q14847 261 aaKnown RBP0.62□□□□□ -2.31
LRCH3-209ENST00000452660 CYTH1Q15438 398 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 ATP6AP1Q15904 470 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 SLC5A12Q1EHB4 618 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 SFT2D3Q587I9 215 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 COA6Q5JTJ3 125 aaKnown RBP0.62□□□□□ -2.31
LRCH3-209ENST00000452660 LGALS9CQ6DKI2 356 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 TMEM225Q6GV28 225 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 TMEM205Q6UW68 189 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 CCDC121Q6ZUS5 278 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 ZNF767PQ75MW2 155 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 SPATA12Q7Z6I5 190 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 ZSCAN30Q86W11 494 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 CBWD2Q8IUF1 395 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 C1orf174Q8IYL3 243 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 FAM71AQ8IYT1 594 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 BLIDQ8IZY5 108 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 TMEM156Q8N614 296 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 NECAP1Q8NC96 275 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 CCDC54Q8NEL0 328 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 DEFB108BQ8NET1 73 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 OR4M2Q8NGB6 313 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 OR52E1Q8NGJ3 308 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 OR10G4Q8NGN3 311 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 FANK1Q8TC84 345 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 YIPF5Q969M3 257 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 NTAN1Q96AB6 310 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 CCDC126Q96EE4 140 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 COX14Q96I36 57 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 ANKRD36BP1Q96IX9 119 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 GPA33Q99795 319 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 DHRS9Q9BPW9 319 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 ZSCAN5AQ9BUG6 496 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 RIOK2Q9BVS4 552 aaKnown RBP0.62□□□□□ -2.31
LRCH3-209ENST00000452660 DNTTIP1Q9H147 329 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 RHOJQ9H4E5 214 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 RANBP3Q9H6Z4 567 aaPredicted RBP0.62□□□□□ -2.31
LRCH3-209ENST00000452660 TRIM45Q9H8W5 580 aaPredicted RBP0.62□□□□□ -2.31
LRCH3-209ENST00000452660 EXD2Q9NVH0 621 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 EURLQ9NYK6 297 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 IL20RAQ9UHF4 553 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 NXT1Q9UKK6 140 aaKnown RBP0.62□□□□□ -2.31
LRCH3-209ENST00000452660 KLK5Q9Y337 293 aaPredicted RBP0.62□□□□□ -2.31
LRCH3-209ENST00000452660 HEBP2Q9Y5Z4 205 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 SLC25A15Q9Y619 301 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 AP4B1Q9Y6B7 739 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 AP1M2Q9Y6Q5 423 aa0.62□□□□□ -2.31
LRCH3-209ENST00000452660 AHNAKQ09666 5890 aaKnown RBP0.62□□□□□ -2.31
LRCH3-209ENST00000452660 IGKV1D-8A0A087WSZ0 117 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 TRBV11-1A0A0K0K1C0 115 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 A0A0U1RQV1 116 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 TSPAN11A1L157 253 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 KRT87PA6NCN2 255 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 ZNF860A6NHJ4 632 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 C2orf74A8MZ97 194 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 ATP6V1G2-DDX39BF2Z307 99 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 TRAPPC2LH3BP13 241 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 J3QRE1 110 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 M0R1B8 84 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 DNASE2O00115 360 aaPredicted RBP0.61□□□□□ -2.31
LRCH3-209ENST00000452660 CHST1O43916 411 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 PRKYO43930 277 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 HSF2BPO75031 334 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 CLDN11O75508 207 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 OR2J2O76002 312 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 OPN1SWP03999 348 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 OPN1LWP04000 364 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 IL4P05112 153 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 ANXA4P09525 319 aaPredicted RBP0.61□□□□□ -2.31
LRCH3-209ENST00000452660 TNNI1P19237 187 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 MX1P20591 662 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 CNR1P21554 472 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 PAX6P26367 422 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 OR1E1P30953 314 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 FMO3P31513 532 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 GTF2H1P32780 548 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 BTCP35070 178 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 GPR6P46095 362 aaPredicted RBP0.61□□□□□ -2.31
LRCH3-209ENST00000452660 EVX1P49640 407 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 PRKXP51817 358 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 RAB25P57735 213 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 ESRRGP62508 458 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 OGDHQ02218 1023 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 GNA12Q03113 381 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 ACTN3Q08043 901 aaPredicted RBP0.61□□□□□ -2.31
LRCH3-209ENST00000452660 EXOSC2Q13868 293 aaKnown RBP0.61□□□□□ -2.31
LRCH3-209ENST00000452660 RCAN2Q14206 197 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 KIAA0087Q14695 138 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 SMU1Q2TAY7 513 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 CCDC40Q4G0X9 1142 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 ZNF684Q5T5D7 378 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 LRRC66Q68CR7 880 aa0.61□□□□□ -2.31
LRCH3-209ENST00000452660 ADNP2Q6IQ32 1131 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms