RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 ABCB9Q9NP78 766 aa17.1■□□□□ 0.33
SDC1-205ENST00000447124 ZNF816-ZNF321PA0A0X1KG74 233 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 ZNF254O75437 659 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 SRSF10O75494 262 aaKnown RBP17.09■□□□□ 0.33
SDC1-205ENST00000447124 MDKP21741 143 aaPredicted RBP17.09■□□□□ 0.33
SDC1-205ENST00000447124 OMGP23515 440 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 GPM6AP51674 278 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 IL13RA1P78552 427 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 MFGE8Q08431 387 aaPredicted RBP17.09■□□□□ 0.33
SDC1-205ENST00000447124 CDONQ4KMG0 1287 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 SLX4IPQ5VYV7 408 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 C12orf73Q69YU5 71 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 SHISA2Q6UWI4 295 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 ZNF788Q6ZQV5 615 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 AMIGO2Q86SJ2 522 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 PDZD9Q8IXQ8 264 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 ANGPTL6Q8NI99 470 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 OR51E1Q8TCB6 317 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 GATAD2BQ8WXI9 593 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 TMIGD2Q96BF3 282 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 GAFA1Q96PS6 74 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 APOL4Q9BPW4 351 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 GPR84Q9NQS5 396 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 ACOXLQ9NUZ1 547 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 KPTNQ9Y664 436 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 PKD1L1Q8TDX9 2849 aa17.09■□□□□ 0.33
SDC1-205ENST00000447124 CMYA5Q8N3K9 4069 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 FAM181BA6NEQ2 426 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 ZAR1LA6NP61 321 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 ZNF732B4DXR9 585 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 NDUFB3O43676 98 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 DLX1P56177 255 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 PRB3Q04118 309 aaPredicted RBP17.08■□□□□ 0.32
SDC1-205ENST00000447124 DGUOKQ16854 277 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 CEACAM21Q3KPI0 293 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 CEP78Q5JTW2 689 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 LCN1P1Q5VSP4 162 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 KDM4DQ6B0I6 523 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 VMO1Q7Z5L0 202 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 PIP4P2Q8N4L2 257 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 FAM81AQ8TBF8 368 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 ASB17Q8WXJ9 295 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 FAM71F1Q96KD3 344 aaPredicted RBP17.08■□□□□ 0.32
SDC1-205ENST00000447124 HIST1H2AAQ96QV6 131 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 DCTN5Q9BTE1 182 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 CHIAQ9BZP6 476 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 KRT84Q9NSB2 600 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 DNAJB11Q9UBS4 358 aa17.08■□□□□ 0.32
SDC1-205ENST00000447124 A0A0U1RQK1 487 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 POM121CA8CG34 1229 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 G3V2T6 193 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 POLR2IP36954 125 aaKnown RBP17.07■□□□□ 0.32
SDC1-205ENST00000447124 RELBQ01201 579 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 FIP1L1Q6UN15 594 aaKnown RBP17.07■□□□□ 0.32
SDC1-205ENST00000447124 MOB3CQ70IA8 216 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 Q8N7P7 452 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 TMEM163Q8TC26 289 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 DUS3LQ96G46 650 aaKnown RBP17.07■□□□□ 0.32
SDC1-205ENST00000447124 IL4I1Q96RQ9 567 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 CNN2Q99439 309 aaKnown RBP17.07■□□□□ 0.32
SDC1-205ENST00000447124 DNTTIP1Q9H147 329 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 ADGRL4Q9HBW9 690 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 NUFIP1Q9UHK0 495 aaKnown RBP17.07■□□□□ 0.32
SDC1-205ENST00000447124 IKZF2Q9UKS7 526 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 AP4S1Q9Y587 144 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 TMEM14AQ9Y6G1 99 aa17.07■□□□□ 0.32
SDC1-205ENST00000447124 TTRP02766 147 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 ACAA1P09110 424 aaPredicted RBP17.06■□□□□ 0.32
SDC1-205ENST00000447124 ATP6V1B1P15313 513 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 RIDAP52758 137 aaKnown RBP17.06■□□□□ 0.32
SDC1-205ENST00000447124 GNG3P63215 75 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 RIPPLY1Q0D2K3 151 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 LRRC10Q5BKY1 277 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 NXNL2Q5VZ03 156 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 ZNF322Q6U7Q0 402 aaPredicted RBP17.06■□□□□ 0.32
SDC1-205ENST00000447124 SLC35F2Q8IXU6 374 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 TMEM86BQ8N661 226 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 OR5A2Q8NGI9 324 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 C8orf46Q8TAG6 207 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 LRTOMTQ8WZ04 291 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 DMRTB1Q96MA1 342 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 GABARAPL1Q9H0R8 117 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 H2AFY2Q9P0M6 372 aaPredicted RBP17.06■□□□□ 0.32
SDC1-205ENST00000447124 ONECUT1Q9UBC0 465 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 NLKQ9UBE8 527 aa17.06■□□□□ 0.32
SDC1-205ENST00000447124 MRM2Q9UI43 246 aaKnown RBP17.06■□□□□ 0.32
SDC1-205ENST00000447124 A0A1B0GTI1 187 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 GPR37O15354 613 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 SIGLEC5O15389 551 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 PSG2P11465 335 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 FAHP16930 419 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 GLRA1P23415 457 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 FASP25445 335 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 CXCR4P61073 352 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 PLEKHG7Q6ZR37 379 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 THAP5Q7Z6K1 395 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 AQP3Q92482 292 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 TNFRSF14Q92956 283 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 ITFG2Q969R8 447 aa17.05■□□□□ 0.32
SDC1-205ENST00000447124 MED30Q96HR3 178 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms