RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 RASL10BQ96S79 203 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 SERPINI1Q99574 410 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 MED18Q9BUE0 208 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ERVK-6Q9BXR3 956 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 POTEKPQ9BYX7 375 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 PRRG3Q9BZD7 231 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 OSBPL8Q9BZF1 889 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 OCR1Q9BZK8 76 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 PLA2G12AQ9BZM1 189 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 VCX2Q9H322 139 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 NIT2Q9NQR4 276 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZCCHC3Q9NUD5 404 aaKnown RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 CLEC5AQ9NY25 188 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 CNIH4Q9P003 139 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ERVK-18Q9QC07 812 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 SPRR3Q9UBC9 169 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 IL20RAQ9UHF4 553 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 BTNL2Q9UIR0 455 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ENPP5Q9UJA9 477 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF225Q9UK10 706 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ABCG2Q9UNQ0 655 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 MRPS18CQ9Y3D5 142 aaKnown RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 ATG4BQ9Y4P1 393 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 MMACHCQ9Y4U1 282 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 AP4S1Q9Y587 144 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 SAR1BQ9Y6B6 198 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 AP4B1Q9Y6B7 739 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 MED12Q93074 2177 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 NCKAP5O14513 1909 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 RAI1Q7Z5J4 1906 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 TGP01266 2768 aa3.62□□□□□ -1.83
HMGB3P5-201ENST00000428894 C2orf92A0A1B0GVN3 265 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 OR51F1A6NGY5 319 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF716A6NP11 495 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 A8MVM7 634 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 DEFB108AA8MXU0 73 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 E7ESA3 106 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 APOC4-APOC2K7ER74 178 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 WWP2O00308 870 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 PHYHO14832 338 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 PSTPIP1O43586 416 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 SH3BGRLO75368 114 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 WBP4O75554 376 aaKnown RBP3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 TRAPPC6AO75865 159 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 RCBTB2O95199 551 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 PSMG1O95456 288 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 SLC16A8O95907 504 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 APOC2P02655 101 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 CRYGCP07315 174 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF735P0CB33 412 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 ADORA3P0DMS8 318 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 CBR1P16152 277 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 ACHEP22303 614 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 RPS3P23396 243 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 PAX6P26367 422 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 PTPN6P29350 595 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 GPX4P36969 197 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 DNASE1L1P49184 302 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 SRP9P49458 86 aaKnown RBP3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 KRTAP10-8P60410 259 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 SRPXP78539 464 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 BTG2P78543 158 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 ASAH1Q13510 395 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 PDK3Q15120 406 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 RPS6KA1Q15418 735 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 TTLL9Q3SXZ7 439 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZBED5Q49AG3 693 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 CCSMST1Q4G0I0 132 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 HIKESHIQ53FT3 197 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 RNLSQ5VYX0 342 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 C12orf54Q6X4T0 127 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 RBM43Q6ZSC3 357 aaKnown RBP3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 P4HA3Q7Z4N8 544 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 VN1R4Q7Z5H5 301 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 ARPINQ7Z6K5 226 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 PIGWQ7Z7B1 504 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 C17orf64Q86WR6 236 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 SLC35F6Q8N357 371 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 LRRC25Q8N386 305 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 MFSD9Q8NBP5 474 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 MORN4Q8NDC4 146 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 OR6X1Q8NH79 312 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 MAGEE2Q8TD90 523 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 TSEN15Q8WW01 171 aaKnown RBP3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 SPSB1Q96BD6 273 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 PYCR2Q96C36 320 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 C2orf88Q9BSF0 95 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 PKIBQ9C010 78 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 NMUR2Q9GZQ4 415 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 SPNS1Q9H2V7 528 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 TMBIM4Q9HC24 238 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 ADAP2Q9NPF8 381 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 NGBQ9NPG2 151 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 IL1RAPQ9NPH3 570 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 TNFRSF19Q9NS68 423 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 MED17Q9NVC6 651 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 VAPAQ9P0L0 249 aa3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 MRPS33Q9Y291 106 aaKnown RBP3.61□□□□□ -1.83
HMGB3P5-201ENST00000428894 POFUT2Q9Y2G5 429 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms