RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CA11O75493 328 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 CLEC3AO75596 197 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 TIAF1O95411 115 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 TXNDC12O95881 172 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 IL18BPO95998 194 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 RENP00797 406 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 C1QCP02747 245 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 HMGN2P05204 90 aaKnown RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 CTXN2P0C2S0 81 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 NPIPA8P0DM63 369 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 NID1P14543 1247 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 ST6GAL1P15907 406 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 CCNOP22674 350 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 DUSP1P28562 367 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 HRH1P35367 487 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 CDKN2AP42771 156 aaKnown RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 SSR2P43308 183 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 FXYD6P3P58550 94 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 RND3P61587 244 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 SCGB2A2Q13296 93 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 FZD2Q14332 565 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 PMCHL1Q16048 86 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 BATFQ16520 125 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 MPV17LQ2QL34 196 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 SMIM21Q3B7S5 101 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 ARHGAP11BQ3KRB8 267 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 OCIAD2Q56VL3 154 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 C1orf100Q5SVJ3 147 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 ARTNQ5T4W7 220 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 GFI1BQ5VTD9 330 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 SDHAF4Q5VUM1 108 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 FAM166AQ6J272 317 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 OGFOD3Q6PK18 319 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF836Q6ZNA1 936 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 CYP2G1PQ6ZSU1 146 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 BHLHA15Q7RTS1 189 aaPredicted RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF550Q7Z398 422 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 CATSPERDQ86XM0 798 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 NPAS4Q8IUM7 802 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 SULF2Q8IWU5 870 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF440Q8IYI8 595 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR52E2Q8NGJ4 325 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR4D5Q8NGN0 318 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 SCAMP5Q8TAC9 235 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 CMTM2Q8TAZ6 248 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLC25A43Q8WUT9 341 aaPredicted RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 RGP1Q92546 391 aaPredicted RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 PINX1Q96BK5 328 aaKnown RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF689Q96CS4 500 aaPredicted RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 SLAMF6Q96DU3 332 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZMYND19Q96E35 227 aaPredicted RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR7D2Q96RA2 312 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 GPX7Q96SL4 187 aaPredicted RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 SMAD5Q99717 465 aaKnown RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 MACROD1Q9BQ69 325 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 ABHD6Q9BV23 337 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 SCRT1Q9BWW7 348 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 RAB11FIP5Q9BXF6 653 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 SPATC1LQ9H0A9 340 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 BANF2Q9H503 90 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF430Q9H8G1 570 aaPredicted RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 MED20Q9H944 212 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 WDR76Q9H967 626 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 WFDC1Q9HC57 220 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMEM106BQ9NUM4 274 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 FLRT3Q9NZU0 649 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 KLK14Q9P0G3 267 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 B3GAT1Q9P2W7 334 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 LHX3Q9UBR4 397 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 GPR132Q9UNW8 380 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 LAMTOR2Q9Y2Q5 125 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 POLR3KQ9Y2Y1 108 aaPredicted RBP4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR51B4Q9Y5P0 310 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 PLXNB2O15031 1838 aa4.99□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMEM265A0A087WTH1 108 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 TRBV9A0A0B4J1U6 114 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 IGHV2OR16-5A0A0B4J2B6 119 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 IGHV1-69-2A0A0G2JMI3 117 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 LOC102723971A0A1B0GUV8 181 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR6C6A6NF89 314 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 MSGN1A6NI15 193 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR4C45A6NMZ5 311 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF732B4DXR9 585 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 H0YIZ8 118 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 TMEM250H0YL14 139 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 J3QR89 54 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 MASP2O00187 686 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 PLPP1O14494 284 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 CDC42EP2O14613 210 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 RRP8O43159 456 aaKnown RBP4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 ZNF264O43296 627 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 RAMP1O60894 148 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 CDS2O95674 445 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 SEMA4FO95754 770 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 IL33O95760 270 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 IFNA5P01569 189 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 DBHP09172 617 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 OR4Q2P0C623 313 aa4.98□□□□□ -1.61
VTI1BP4-201ENST00000427516 NBEAP1P0C6P0 100 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms